Photocontrolled miR-148b nanoparticles cause apoptosis, inflammation and regression of Ras induced epidermal squamous cell carcinomas in mice.
Biomaterials, Liu, Y, Bailey, J, Abu-Laban, M, Li, S, Chen, C, Glick, Adam, Hayes, D, 2020

Effects of postpartum acetylsalicylic acid on metabolic status, health, and production in lactating dairy cattle.
Journal of dairy science, Barragan, Adrian, Hovingh, Ernest, Bas, S, Lakritz, J, Byler, L, Ludwikowski, A, Takitch, S, Zug, J, Hann, S, 2020

Drug-target binding quantitatively predicts optimal antibiotic dose levels in quinolones.
PLoS computational biology, Clarelli, F, Palmer, A, Singh, B, Storflor, M, Lauksund, S, Cohen, T, Abel, Soeren, Abel- zur Wiesch, Pia Karoline, 2020

Metabolic Profiling Reveals Aggravated Non-Alcoholic Steatohepatitis in High-Fat High-Cholesterol Diet-Fed Apolipoprotein E-Deficient Mice Lacking Ron Receptor Signaling.
Metabolites, Allen, J, Dey, A, Cai, Jingjing, Zhang, J, Tian, Y, Kennett, Mary, Ma, Yanyuan, Liang, T, Patterson, Andrew, Hankey, Pamela, 2020

Lipocalin 2 deficiency-induced gut microbiota dysbiosis evokes metabolic syndrome in aged mice.
Physiological genomics, Singh, Vishal, Galla, S, Golonka, R, Patterson, Andrew, Chassaing, B, Joe, B, Vijay-Kumar, M, 2020

Impact of Facultative Bacteria on the Metabolic Function of an Obligate Insect-Bacterial Symbiosis.
mBio, Blow, F, Ankrah NYD, None, Clark, N, Koo, I, Allman, E, Liu, Q, Anitha, M, Patterson, Andrew, Douglas, A, 2020

The microbiome modulating activity of bile acids.
Gut microbes, Tian, Y, Gui, W, Koo, I, Smith, Philip, Allman, E, Nichols, R, Rimal, B, Cai, J, Liu, Q, Patterson, Andrew, 2020

Surveillance for Heterakis spp. in Game Birds and Cage-Free, Floor-Raised Poultry in Pennsylvania.
Avian diseases, Greenawalt, D, Yabsley, M, Williams, L, Casalena, M, Boyd, R, Debelak, E, Wildlicka, H, Phillips, E, Wallner-Pendleton, Eva, Dunn, Patricia, Brown, Justin, 2020

NLRC5 Serves as a Pro-viral Factor During Influenza Virus Infection in Chicken Macrophages.
Frontiers in cellular and infection microbiology, Chothe, S, Nissly, R, Lim, L, Bhushan, G, Bird, I, Radzio-Basu, J, Jayarao, Bhushan, Kuchipudi, Suresh, 2020

Ultrasound-Guided Cytosolic Protein Delivery via Transient Fluorous Masks.
ACS nano, Sloand, J, Nguyen, Toan, Zinck, S, Cook, E, Zimudzi, T, Showalter, Scott, Glick, Adam, Simon, Julianna, Medina, Scott, 2020

Iminosugars With Endoplasmic Reticulum α-Glucosidase Inhibitor Activity Inhibit ZIKV Replication and Reverse Cytopathogenicity in vitro.
Frontiers in microbiology, Bhushan, G, Lim, L, Bird, I, Chothe, S, Nissly, R, Kuchipudi, Suresh, 2020

Selection or drift: The population biology underlying transposon insertion sequencing experiments.
Computational and structural biotechnology journal, Mahmutovic, A, Abel- zur Wiesch, Pia Karoline, Abel, Soeren, 2020

Antibacterial effects of low-temperature plasma generated by atmospheric-pressure plasma jet are mediated by reactive oxygen species.
Scientific reports, Nicol, M, Brubaker, T, Honish, 2nd, B, Simmons, A, Kazemi, A, Geissel, M, Whalen, C, Siedlecki, Christopher, Bilen, Sven, Knecht, Sean, Kirimanjeswara, Girish, 2020

Perfluorooctane sulfonate alters gut microbiota-host metabolic homeostasis in mice.
Toxicology, Zhang, L, Rimal, B, Nichols, R, Tian, Y, Smith, Philip, Hatzakis, E, Chang, S, Butenhoff, J, Peters, Jeffrey, Patterson, Andrew, 2020

Composite score analysis for unsupervised comparison and network visualization of metabolomics data
Analytica Chimica Acta, Kellogg, Joshua J., Kvalheim, Olav M., Cech, Nadja B., 2020

Detection and removal of biologically active organic micropollutants from hospital wastewater
Science of the Total Environment, Castillo Meza, Luis, Piotrowski, Paulina, Farnan, James, Tasker, Travis L., Xiong, Boya, Weggler, Benedikt, Murrell, Kyra, Dorman, Frank L., Vanden Heuvel, John P., Burgos, William D., 2020

A rapid and label-free platform for virus capture and identification from clinical samples.
Proceedings of the National Academy of Sciences of the United States of America, Yeh, Yin-Ting, Gulino, K, Zhang, Yu, Sabestien, A, Chou, T, Zhou, B, Lin, Zhenwu, Albert, Istvan, Lu, Huaguang, Swaminathan, V, Ghedin, E, Terrones Maldonado, Mauricio, 2020

Re-engineering Antimicrobial Peptides into Oncolytics Targeting Drug-Resistant Ovarian Cancers
Cellular and Molecular Bioengineering, Aronson, Matthew, Dahl, Erika, Halle, Jacob, Simonson, Andrew, Gogal, Rose, Glick, Adam, Aird, Katherine, Medina, Scott, 2020

Metatranscriptomic Analysis of the Mouse Gut Microbiome Response to the Persistent Organic Pollutant 2,3,7,8-Tetrachlorodibenzofuran.
Metabolites, Nichols, Renea, Zhang, Jian, Cai, Jingjing, Murray, Iain, Koo, I, Smith, Philip, Perdew, Gary, Patterson, Andrew, 2019

CLARITE Facilitates the Quality Control and Analysis Process for EWAS of Metabolic-Related Traits
Frontiers in Genetics, Lucas, Anastasia M., Palmiero, Nicole E., McGuigan, John, Passero, Kristin, Zhou, Jiayan, Orie, Deven, Ritchie, Marylyn D., Hall, Molly A., 2019

Identification of Sero-Diagnostic Antigens for the Early Diagnosis of Johne’s Disease using MAP Protein Microarrays
Scientific reports, Li, Lingling, Bannantine, John P., Campo, Joseph J., Randall, Arlo, Grohn, Yrjo T., Schilling, Megan A., Katani, Robab, Radzio-Basu, Jessica, Easterling, Laurel, Kapur, Vivek, 2019

The Human Transient Receptor Potential Melastatin 2 Ion Channel Modulates ROS Through Nrf2
Scientific reports, Bao, Lei, Festa, Fernanda, Freet, Christopher S., Lee, John P., Hirschler-Laszkiewicz, Iwona M., Chen, Shu jen, Keefer, Kerry A., Wang, Hong Gang, Patterson, Andrew D., Cheung, Joseph Y., Miller, Barbara A., 2019

Crth2 receptor signaling down-regulates lipopolysaccharide-induced NF-κB activation in murine macrophages via changes in intracellular calcium
FASEB journal : official publication of the Federation of American Societies for Experimental Biology, Diwakar, Bastihalli T., Yoast, Ryan, Nettleford, Shaneice, Qian, Fenghua, Lee, Tai Jung, Berry, Svanjita, Huffnagle, Ian, Rossi, Randall M., Trebak, Mohamed, Paulson, Robert F., Prabhu, K. Sandeep, 2019

p38 MAP-kinase inhibitor protects against platelet-activating factor-induced death in mice
Free Radical Biology and Medicine, Abhilasha, Kandahalli Venkataranganayaka, Sumanth, Mosale Seetharam, Chaithra, Vyala Hanumanthareddy, Jacob, Shancy Petsel, Thyagarajan, Anita, Sahu, Ravi Prakash, Rajaiah, Rajesh, Prabhu, Kumble Sandeep, Kemparaju, Kempaiah, Travers, Jeffrey Bryant, Chen, Chu Huang, Marathe, Gopal Kedihithlu, 2019

Role of selenoproteins in bacterial pathogenesis
Biological Trace Element Research, Sumner, Sarah E., Markley, Rachel L., Kirimanjeswara, Girish S., 2019

Assessment of a commercially available serum pregnancy-specific protein B test in free-ranging elk (Cervus canadensis) in Pennsylvania, USA
Journal of wildlife diseases, Seixas, Julia Silva, Jayarao, Bhushan M., Banfield, Jeremiah E., Johnson, Joshua B., Brown, Justin D., 2019

Inflammation induces stress erythropoiesis through heme-dependent activation of SPI-C
Science signaling, Bennett, Laura F., Liao, Chang, Quickel, Michael D., Yeoh, Beng San, Vijay-Kumar, Matam, Hankey-Giblin, Pamela, Prabhu, K. Sandeep, Paulson, Robert F., 2019

Specialist and generalist fungal parasites induce distinct biochemical changes in the mandible muscles of their host
International journal of molecular sciences, Zheng, Shanshan, Loreto, Raquel, Smith, Philip, Patterson, Andrew, Hughes, David, Wang, Liande, 2019

Acute phase protein, α – 1- acid glycoprotein (AGP-1), has differential effects on TLR-2 and TLR-4 mediated responses
Immunobiology, Sumanth, Mosale Seetharam, Abhilasha, Kandahalli Venkataranganayaka, Jacob, Shancy Petsel, Chaithra, Vyala Hanumanthareddy, Basrur, Venkatesha, Willard, Belinda, McIntyre, Thomas M., Prabhu, K. Sandeep, Marathe, Gopal K., 2019

Detection of CTX-M-1 extended-spectrum beta-lactamase among ceftiofur-resistant Salmonella enterica clinical isolates of poultry
Journal of Veterinary Diagnostic Investigation, Denagamage, Thomas N., Wallner-Pendleton, Eva A., Jayarao, Bhushan M., Xiaoli, Lingzi, Dudley, Edward G., Wolfgang, David, Kariyawasam, Subhashinie, 2019

Reaction Kinetic Models of Antibiotic Heteroresistance.
International journal of molecular sciences, Martinecz, A, Clarelli, F, Abel, Soeren, Abel- zur Wiesch, Pia Karoline, 2019

Transposon-insertion sequencing screens unveil requirements for EHEC growth and intestinal colonization.
PLoS pathogens, Warr, A, Hubbard, T, Munera, D, Blondel, C, Abel- zur Wiesch, Pia Karoline, Abel, Soeren, Wang, X, Davis, B, Waldor, M, 2019

Nutrient Sensing in CD11c Cells Alters the Gut Microbiota to Regulate Food Intake and Body Mass
Cell Metabolism, Chagwedera, D. Nyasha, Ang, Qi Yan, Bisanz, Jordan E., Leong, Yew Ann, Ganeshan, Kirthana, Cai, Jingwei, Patterson, Andrew David, Turnbaugh, Peter J., Chawla, Ajay, 2019

Gender differences in phytoestrogens and the relationship with speed of processing in older adults: A cross-sectional analysis of NHANES, 1999–2002
Nutrients, Alwerdt, Jessie, Patterson, Andrew D., Sliwinski, Martin J., 2019

Metagenomic analysis of the fecal microbiomes from Escherichia coli O157:H7-shedding and non-shedding cows on a single dairy farm
Food Control, Salaheen, Serajus, Kim, Seon Woo, Karns, Jeffrey S., Hovingh, Ernest Peter, Haley, Bradd J., Van Kessel, Jo Ann S., 2019

Gdf15 regulates murine stress erythroid progenitor proliferation and the development of the stress erythropoiesis niche
Blood Advances, Hao, Siyang, Xiang, Jie, Wu, Dai Chen, Fraser, James W., Ruan, Baiye, Cai, Jingwei, Patterson, Andrew D., Lai, Zhi Chun, Paulson, Robert F., 2019

Evaluating the structural complexity of isomeric bile acids with ion mobility spectrometry
Analytical and Bioanalytical Chemistry, Zheng, Xueyun, Smith, Francesca B., Aly, Noor A., Cai, Jingwei, Smith, Richard D., Patterson, Andrew David, Baker, Erin S., 2019

Selenoproteome Identification in Inflamed Murine Primary Bone Marrow-Derived Macrophages by Nano-LC Orbitrap Fusion Tribrid Mass Spectrometry
Journal of the American Society for Mass Spectrometry, Korwar, Arvind M., Shay, Ashley E., Basrur, Venkatesha, Conlon, Kevin, Prabhu, K. Sandeep, 2019

Selective Ah receptor ligands mediate enhanced SREBP1 proteolysis to restrict lipogenesis in sebocytes.
Toxicological sciences : an official journal of the Society of Toxicology, Muku, G, Blazanin, N, Dong, F, Smith, Philip, Thiboutot, Diane, Gowdahalli, Krishnegowda, Amin, Shantu, Murray, Iain, Perdew, Gary, 2019

A Quantitative HILIC-MS/MS Assay of the Metabolic Response of Huh-7 Cells Exposed to 2,3,7,8-Tetrachlorodibenzo-p-Dioxin.
Metabolites, Liu, Q, Cai, Jingjing, Nichols, Renea, Tian, Y, Zhang, Jian, Smith, Philip, Wang, Yanling, Yan, C, Patterson, Andrew, 2019

Isolation and identification of aryl hydrocarbon receptor modulators in white button mushrooms (Agaricus bisporus)
Journal of agricultural and food chemistry, Tian, Yuan, Gui, Wei, Smith, Philip B., Koo, Imhoi, Murray, Iain A., Cantorna, Margherita T., Perdew, Gary H., Patterson, Andrew D., 2019

The bacterial siderophore enterobactin confers survival advantage to Salmonella in macrophages
Gut Microbes, Saha, Piu, Xiao, Xia, Yeoh, Beng San, Chen, Qiuyan, Katkere, Bhuvana, Kirimanjeswara, Girish Soorapp, Vijay-Kumar, Matam, 2019

A probe-based real-time PCR assay for the detection of Neospora caninum in clinical samples from cattle
Veterinary Parasitology, Barry, Rhiannon, Nissly, Ruth H., Feria, Willard, Thirumalapura, Nagaraja, Tewari, Deepanker, Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2019

Selenium-rich maize modulates the expression of prostaglandin genes in lipopolysaccharide-stimulated RAW264.7 macrophages
Food and Function, Dhanjal, Noorpreet I., Sharma, Siddharth, Skalny, Anatoly V., Skalnaya, Margarita G., Ajsuvakova, Olga P., Tinkov, Alexey A., Zhang, Feng, Guo, Xiong, Prabhu, K. Sandeep, Tejo Prakash, N., 2019

Diversity of extended-spectrum cephalosporin-resistant escherichia coli in feces from calves and cows on Pennsylvania dairy farms
Foodborne pathogens and disease, Salaheen, Serajus, Cao, Huilin, Sonnier, Jakeitha L., Kim, Seon Woo, Del Collo, Laura P., Hovingh, Ernest Peter, Karns, Jeffrey S., Haley, Bradd J., Van Kessel, Jo Ann S., 2019

Downregulation of CD73 associates with T cell exhaustion in AML patients
Journal of Hematology and Oncology, Kong, Yaxian, Jia, Bei, Zhao, Chenchen, Claxton, David, Sharma, Arati, Annageldiyev, Charyguly, Fotos, Joseph, Zeng, Hui, Paulson, Robert, Prabhu, Kumble Sandeep, Zheng, Hong, 2019

Microbiota metabolism promotes synthesis of the human Ah receptor agonist 2,8-dihydroxyquinoline.
Journal of Proteome Research, Hubbard, Troy D., Liu, Qing, Murray, Iain A., Dong, Fangcong, Miller, Charles, Smith, Philip B., Gowda, Krishne, Lin, Jyh Ming, Amin, Shantu, Patterson, Andrew D., Perdew, Gary H., 2019

Vitamin A and vitamin D regulate the microbial complexity, barrier function, and the mucosal immune responses to ensure intestinal homeostasis.
Critical reviews in biochemistry and molecular biology, Cantorna, Margherita, Snyder, Lori, Arora, J, 2019

Associations of pre- and postpartum lying time with metabolic, inflammation, and health status of lactating dairy cows
Journal of dairy science, Piñeiro, J. M., Menichetti, B. T., Barragan, Adrian, Relling, A. E., Weiss, W. P., Bas, S., Schuenemann, G. M., 2019

Associations of postpartum lying time with culling, milk yield, cyclicity, and reproductive performance of lactating dairy cows
Journal of dairy science, Piñeiro, J. M., Menichetti, B. T., Barragan, Adrian, Relling, A. E., Weiss, W. P., Bas, S., Schuenemann, G. M., 2019

Opportunities and Limitations for Untargeted Mass Spectrometry Metabolomics to Identify Biologically Active Constituents in Complex Natural Product Mixtures
Journal of Natural Products, Caesar, Lindsay K., Kellogg, Joshua, Kvalheim, Olav M., Cech, Nadja B., 2019

Complete genome sequences of 20 nontyphoidal Salmonella isolates from Rwanda
Microbiology Resource Announcements, Byukusenge, Maurice, Li, Lingling, Uwanyirigira, Mediatrice, Vepachedu, Venkata R., Kariyawasam, Subhashinie, Nzayirambaho, Manassé, Kuchipudi, Suresh V., Jayarao, Bhushan M., 2019

Effects of Human Electro-Muscular Incapacitation (HEMI) Devices on Cardiovascular Changes in Anesthetized Swine as Measured by Transesophageal Echocardiography (TEE)
Journal of Forensic Sciences, Werner, Jacob Robert, Murray, W. Bosseau, Kennett, Mary J., Jenkins, Jr., David Marion, Liszka, Edward, Hughes, Edward L., 2019

Angiomotin-like 1 links paramyxovirus M proteins to NEDD4 family ubiquitin ligases
Viruses, Ray, Greeshma, Schmitt, Phuong Tieu, Schmitt, Anthony P., 2019

Berberine directly affects the gut microbiota to promote intestinal farnesoid X receptor activation
Drug Metabolism and Disposition, Tian, Yuan, Cai, Jingwei, Gui, Wei, Nichols, Robert G., Koo, Imhoi, Zhang, Jingtao, Anitha, Mallappa, Patterson, Andrew David, 2019

Transdermal Delivery of Enfuvirtide in a Porcine Model Using a Low-Frequency, Low-Power Ultrasound Transducer Patch
Ultrasound in Medicine and Biology, Snook, Kevin A., Van Ess, Robert, Werner, Jacob Robert, Clement, Ryan S., Ocon-Grove, Olga M., Dodds, Jeffery, Ryan, Kevin J., Acosta, Edward P., Zurlo, John, Mulvihill, Maureen L., 2019

Metabolomic approaches reveal the role of CAR in energy metabolism
Journal of Proteome Research, Chen, Fengming, Coslo, Denise M., Chen, Tao, Zhang, Limin, Tian, Yuan, Smith, Philip B., Patterson, Andrew D., Omiecinski, Curtis J., 2019

Niveles de fósforo y sus efectos sobre el crecimiento y consumo en alpacas hembras en los Andes peruanos
Revista de Investigaciones Veterinarias del Peru, Carlos Quispe, E., Edith Ancco, G., van Saun, Robert, Carlos Gómez, B., 2019

PCB126 blocks the thermogenic beiging response of adipocytes
Environmental Science and Pollution Research, Gourronc, Francoise A., Perdew, Gary H., Robertson, Larry W., Klingelhutz, Aloysius J., 2019

Yap1 promotes proliferation of transiently amplifying stress erythroid progenitors during erythroid regeneration
Experimental Hematology, Hao, Siyang, Matsui, Yurika, Lai, Zhi Chun, Paulson, Robert F., 2019

Gab2 and Gab3 redundantly suppress colitis by modulating macrophage and CD8+ T-cell activation
Frontiers in immunology, Wang, Zhengqi, Vaughan, Tamisha Y., Zhu, Wandi, Chen, Yuhong, Fu, Guoping, Medrzycki, Magdalena, Nishio, Hikaru, Bunting, Silvia T., Hankey-Giblin, Pamela A., Nusrat, Asma, Parkos, Charles A., Wang, Demin, Wen, Renren, Bunting, Kevin D., 2019

Heat shock protein 70 (Hsp70) mediates Zika virus entry, replication, and egress from host cells
Emerging Microbes and Infections, Pujhari, Sujit, Brustolin, Marco, Macias, Vanessa M., Nissly, Ruth H., Nomura, Masashi, Kuchipudi, Suresh V., Rasgon, Jason L., 2019

A random subset implementation of weighted quantile sum (WQSRS) regression for analysis of high-dimensional mixtures
Communications in Statistics: Simulation and Computation, Curtin, Paul, Kellogg, Joshua, Cech, Nadja, Gennings, Chris, 2019

Molecular epidemiology of Marek’s disease virus in central Pennsylvania, USA
Virus Evolution, Bell, Andrew, Kennedy, David, Jones, Matthew, Cairns, Christopher, Pandey, Utsav, Dunn, Patricia, Szpara, Moriah, Read, Andrew, 2019

Antimicrobial resistance among escherichia coli isolated from veal calf operations in Pennsylvania
Foodborne pathogens and disease, Salaheen, Serajus, Kim, Seon Woo, Cao, Huilin, Wolfgang, David R., Hovingh, Ernest Peter, Karns, Jeffrey S., Haley, Bradd J., Van Kessel, Jo Ann S., 2019

Dual role of a C-terminally truncated isoform of large tumor suppressor kinase 1 in the regulation of hippo signaling and tissue growth
DNA and Cell Biology, Matsui, Yurika, Zhang, Yifan, Paulson, Robert F., Lai, Zhi Chun, 2019

Age-associated distribution of antimicrobial-resistant Salmonella enterica and Escherichia coli isolated from dairy herds in Pennsylvania, 2013--2015
Foodborne pathogens and disease, Cao, Huilin, Pradhan, Abani, Karns, Jeffrey, Hovingh, Ernest, Wolfgang, David, Vinyard, Bryan, Kim, Seon, Salaheen, Serajus, Haley, Bradd, Van Kessel, Jo Ann S, None, 2019

Antimicrobial resistance in fecal Escherichia coli and Salmonella enterica from dairy calves: a systematic review
Foodborne pathogens and disease, Springer, Hayley, Denagamage, Thomas, Fenton, Ginger, Haley, Bradd, Van Kessel, Jo Ann S, None, Hovingh, Ernest, 2019

The multiple roles of the unfolded protein response regulator IRE1α in cancer
Molecular Carcinogenesis, Chalmers, Fiona, Mogre, Saie, Son, Jeongin, Blazanin, Nicholas, Glick, Adam Bleier, 2019

Microbiota fermentation-NLRP3 axis shapes the impact of dietary fibres on intestinal inflammation
Gut, Singh, Vishal, Yeoh, Beng San, Walker, Rachel E., Xiao, Xia, Saha, Piu, Golonka, Rachel M., Cai, Jingwei, Bretin, Alexis Charles Andre, Cheng, Xi, Liu, Qing, Flythe, Michael D., Chassaing, Benoit, Shearer, Gregory C., Patterson, Andrew David, Gewirtz, Andrew T., Vijay-Kumar, Matam, 2019

Vitamin D is required for ILC3 derived IL-22 and protection from Citrobacter rodentium infection
Frontiers in immunology, Lin, Yang Ding, Arora, Juhi, Diehl, Kevin, Bora, Stephanie A., Cantorna, Margherita T., 2019

Selective Ah receptor modulators attenuate NPC1L1-mediated cholesterol uptake through repression of SREBP-2 transcriptional activity
Laboratory Investigation, Muku, Gulsum E., Kusnadi, Ann, Kuzu, Guray, Tanos, Rachel, Murray, Iain Alexander, Gowda, Krishne, Amin, Shantu, Perdew, Gary H., 2019

Smartphone-Based Point-of-Care Microfluidic Platform Fabricated with a ZnO Nanorod Template for Colorimetric Virus Detection
ACS Sensors, Xia, Yiqiu, Chen, Yizhu, Tang, Yeming, Cheng, Gong, Yu, Xu, He, Hongzhang, Cao, Guohong, Lu, Huaguang, Liu, Zhiwen, Zheng, Si Yang, 2019

Vitamin D regulates the microbiota to control the numbers of RORγt/FoxP3+ regulatory T cells in the colon
Frontiers in immunology, Cantorna, Margherita T., Lin, Yang Ding, Arora, Juhi, Bora, Stephanie, Tian, Yuan, Nichols, Robert G., Patterson, Andrew D., 2019

Cross Sectional Study and Risk Factors Analysis of Francisella tularensis in Soil Samples in Punjab Province of Pakistan
Frontiers in Cellular and Infection Microbiology, Muhammad, Javed, Rabbani, Masood, Shabbir, Muhammad Zubair, Muhammad, Khushi, Ghori, Muhammad Taslim, Chaudhry, Haroon Rashid, Hassnain, Zia Ul, Jamil, Tariq, Abbas, Tariq, Chaudhry, Muhammad Hamid, Haisem-Ur-Rasool, Muhammad, Ali, Muhammad Asad, Nisar, Muhammad, Kirimanjeswara, Girish S., Jayarao, Bhushan M., 2019

Regulatory mechanisms mediated by peroxisome proliferator-activated receptor-β/δ in skin cancer
Molecular Carcinogenesis, Peters, Jeffrey M., Kim, Dae J., Bility, Moses T., Borland, Michael G., Zhu, Bokai, Gonzalez, Frank J., 2019

Monocyte-derived macrophages expand the murine stress erythropoietic niche during the recovery from anemia
Blood, Liao, Chang, Sandeep Prabhu, K., Paulson, Robert F., 2018

Mtf2-PRC2 control of canonical Wnt signaling is required for definitive erythropoiesis
Cell Discovery, Rothberg, Janet L.Manias, Maganti, Harinad B., Jrade, Hani, Porter, Christopher J., Palidwor, Gareth A., Cafariello, Christopher, Battaion, Hannah L., Khan, Safwat T., Perkins, Theodore J., Paulson, Robert F., Ito, Caryn Y., Stanford, William L., 2018

Gut microbiota and intestinal FXR mediate the clinical benefits of metformin
Nature Medicine, Sun, Lulu, Xie, Cen, Wang, Guang, Wu, Yue, Wu, Qing, Wang, Xuemei, Liu, Jia, Deng, Yangyang, Xia, Jialin, Chen, Bo, Zhang, Songyang, Yun, Chuyu, Lian, Guan, Zhang, Xiujuan, Zhang, Heng, Bisson, William H., Shi, Jingmin, Gao, Xiaoxia, Ge, Pupu, Liu, Cuihua, Krausz, Kristopher W., Nichols, Robert G., Cai, Jingwei, Rimal, Bipin, Patterson, Andrew D., Wang, Xian, Gonzalez, Frank J., Jiang, Changtao, 2018

Antimicrobial Resistance in Fecal Escherichia coli and Salmonella enterica from Dairy Calves: A Systematic Review.
Foodborne pathogens and disease, Springer, Hayley, Denagamage, T, Fenton, G, Haley, B, VanKessel JAS, None, Hovingh, Ernest, 2018

Structural and Functional Analysis of the Gut Microbiome for Toxicologists
Current Protocols in Toxicology, Nichols, Robert G., Cai, Jingwei, Murray, Iain Alexander, Koo, Imhoi, Smith, Philip B., Perdew, Gary H., Patterson, Andrew David, 2018

Multiplatform physiologic and metabolic phenotyping reveals microbial toxicity
mSystems, Cai, Jingwei, Nichols, Robert G., Koo, Imhoi, Kalikow, Zachary A., Zhang, Limin, Tian, Yuan, Zhang, Jingtao, Smith, Philip B., Patterson, Andrew David, 2018

Metabolomic Approaches Reveal the Role of CAR in Energy Metabolism.
Journal of proteome research, 2018

Dysregulated Microbial Fermentation of Soluble Fiber Induces Cholestatic Liver Cancer
Cell, Singh, Vishal, Yeoh, Beng San, Chassaing, Benoit, Xiao, Xia, Saha, Piu, Aguilera Olvera, Rodrigo, Lapek, John D., Zhang, Limin, Wang, Wei-bei, Hao, Sijie, Flythe, Michael D., Gonzalez, David J., Cani, Patrice D., Conejo-Garcia, Jose R., Xiong, Na, Kennett, Mary J., Joe, Bina, Patterson, Andrew David, Gewirtz, Andrew T., Vijay-Kumar, Matam, 2018

Lipid metabolism and lipophagy in cancer
Biochemical and Biophysical Research Communications, Maan, Meenu, Peters, Jeffrey Maurice, Dutta, Mainak, Patterson, Andrew David, 2018

Detection of adulteration in Hydrastis canadensis (goldenseal) dietary supplements via untargeted mass spectrometry-based metabolomics
Food and Chemical Toxicology, Wallace, Emily D., Oberlies, Nicholas H., Cech, Nadja B., Kellogg, Joshua J., 2018

Molecular Regulation of Carcinogenesis: Friend and Foe.
Toxicological sciences : an official journal of the Society of Toxicology, 2018

Intestine farnesoid X receptor agonist and the gut microbiota activate G-protein bile acid receptor-1 signaling to improve metabolism
Hepatology, Pathak, Preeti, Xie, Cen, Nichols, Robert G., Ferrell, Jessica M., Boehme, Shannon, Krausz, Kristopher W., Patterson, Andrew David, Gonzalez, Frank J., Chiang, John Y.L., 2018

Ron Receptor Signaling Ameliorates Hepatic Fibrosis in a Diet-Induced Nonalcoholic Steatohepatitis Mouse Model
Journal of Proteome Research, Allen, Joselyn, Zhang, Jingtao, Quickel, Michael D., Kennett, Mary J., Patterson, Andrew David, Giblin, Pamela Hankey, 2018

Assessment of daily activity patterns and biomarkers of pain, inflammation, and stress in lactating dairy cows diagnosed with clinical metritis
Journal of dairy science, Barragan, A. A., Piñeiro, J. M., Schuenemann, G. M., Rajala-Schultz, P. J., Sanders, D. E., Lakritz, J., Bas, S., 2018

Topical rectal antiseptic at time of prostate biopsy
International Urology and Nephrology, Park, Rosa, Gyorfi, Justin, Dewan, Kalyan, Kirimanjeswara, Girish Soorapp, Clark, Joseph Y., Kaag, Matthew G., Lehman, Kathleen, Raman, Jay, 2018

Whole-genome sequence analysis reveals unique SNP profiles to distinguish vaccine and wild-type strains of bovine herpesvirus-1 (BoHV-1)
Virology, Chothe, Shubhada K., Sebastian, Aswathy, Thomas, Asha, Nissly, Ruth H., Wolfgang, David, Byukusenge, Maurice, Mor, Sunil Kumar, Goyal, Sagar M., Albert, Istvan, Tewari, Deepanker, Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2018

The Pandemic Threat of Emerging H5 and H7 Avian Influenza Viruses.
Viruses, Sutton, Troy, 2018

Novel Flu Viruses in Bats and Cattle: "Pushing the Envelope" of Influenza Infection.
Veterinary sciences, Kuchipudi, Suresh, Nissly, R, 2018

Integration of Biochemometrics and Molecular Networking to Identify Antimicrobials in Angelica keiskei
Planta Medica, Caesar, Lindsay K., Kellogg, Joshua J., Kvalheim, Olav M., Cech, Richard A., Cech, Nadja B., 2018

Inhibition of tumorigenesis by peroxisome proliferator-activated receptor (PPAR)-dependent cell cycle blocks in human skin carcinoma cells
Toxicology, Borland, Michael G., Kehres, Ellen M., Lee, Christina, Wagner, Ashley L., Shannon, Brooke E., Albrecht, Prajakta P., Zhu, Bokai, Gonzalez, Frank J., Peters, Jeffrey M., 2018

Selenoproteins regulate stress erythroid progenitors and spleen microenvironment during stress erythropoiesis
Blood, Liao, Chang, Hardison, Ross Cameron, Kennett, Mary J., Carlson, Bradley A., Paulson, Robert, Prabhu, Kumble Sandeep, 2018

Regulation of vitamin D metabolism following disruption of the microbiota using broad spectrum antibiotics
Journal of Nutritional Biochemistry, Bora, Stephanie A., Kennett, Mary J., Smith, Philip B., Patterson, Andrew David, Cantorna, Margherita Teresa-Anna, 2018

Prebiotic effects of white button mushroom (Agaricus bisporus) feeding on succinate and intestinal gluconeogenesis in C57BL/6 mice
Journal of Functional Foods, Tian, Yuan, Nichols, Robert G., Roy, Pratiti, Gui, Wei, Smith, Philip B., Zhang, Jingtao, Lin, Yangding, Weaver, Veronika, Cai, Jingwei, Patterson, Andrew David, Cantorna, Margherita Teresa-Anna, 2018

Modeling Marek's disease virus transmission: A framework for evaluating the impact of farming practices and evolution
Epidemics, Kennedy, David A., Dunn, Patricia, Read, Andrew Fraser, 2018

The HSV-1 mechanisms of cell-to-cell spread and fusion are critically dependent on host PTP1B
PLoS pathogens, Carmichael, Jillian C., Yokota, Hiroki, Craven, Rebecca C., Schmitt, Anthony, Wills, John W., 2018

Diets low in saturated fat with different unsaturated fatty acid profiles similarly increase serum-mediated cholesterol efflux from THP-1 macrophages in a population with or at risk for metabolic syndrome
Journal of Nutrition, Liu, Xiaoran, Garban, Josephine, Jones, Peter J., Vanden Heuvel, John Patrick, Lamarche, Benoît, Jenkins, David J., Connelly, Philip W., Couture, Patrick, Pu, Shuaihua, Fleming, Jennifer Anne, West, Sheila Grace, Kris-Etherton, Penny Margaret, 2018

Complete genome sequences of three related avian avulavirus 1 isolates from poultry farmers in Pakistan
Genome Announcements, Zubair Shabbir, M., Nissly, Ruth Helmus, Ahad, Abdul, Rabbani, Masood, Chothe, Shubhada K., Sebastian, Aswathy, Albert, Istvan, Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2018

Identification of intestinal UDP-Glucuronosyltransferase inhibitors in green tea (Camellia sinensis) using a biochemometric approach
Drug Metabolism and Disposition, Tian, Dan Dan, Kellogg, Joshua, Okut, Neşe, Oberlies, Nicholas H., Cech, Nadja B., Shen, Danny D., McCune, Jeannine S., Paine, Mary F., 2018

Metabolomics reveals aryl hydrocarbon receptor activation induces liver and mammary gland metabolic dysfunction in lactating mice
Journal of Proteome Research, Belton, Kerry R., Tian, Yuan, Zhang, Limin, Anitha, Mallappa, Smith, Philip B., Perdew, Gary H., Patterson, Andrew David, 2018

Whole-genome sequence of infectious pancreatic necrosis virus isolated from farmed brook trout (Salvelinus fontinalis) in Pennsylvania
Genome Announcements, Palchak, Kay, Chothe, Shubhada K., Sebastian, Aswathy, Nissly, Ruth H., Barry, Rhiannon, Albert, Istvan, Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2018

Vitamin A deficiency in mice alters host and gut microbial metabolism leading to altered energy homeostasis
Journal of Nutritional Biochemistry, Tian, Yuan, Nichols, Robert G., Cai, Jingwei, Patterson, Andrew David, Cantorna, Margherita Teresa-Anna, 2018

Whole-genome sequences of 18 bovine alphaherpesvirus 1 field isolates from Pennsylvania and Minnesota
Genome Announcements, Chothe, Shubhada K., Sebastian, Aswathy, Thomas, Asha, Nissly, Ruth, Byukusenge, Maurice, Wolfgang, David, Mor, Sunil Kumar, Goyal, Sagar, Albert, Istvan, Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2018

Bioaccessible selenium sourced from Se-rich mustard cake facilitates protection from TBHP induced cytotoxicity in melanoma cells
Food and Function, Jaiswal, Sumit K., Prakash, Ranjana, Prabhu, Kumble Sandeep, Tejo Prakash, N., 2018

H5N2 vaccine viruses on Russian and US live attenuated influenza virus backbones demonstrate similar infectivity, immunogenicity and protection in ferrets
Vaccine, Czakó, Rita, Vogel, Leatrice, Sutton, Troy, Matsuoka, Yumiko, Krammer, Florian, Chen, Zhongying, Jin, Hong, Subbarao, Kanta, 2018

Biochemometrics to Identify Synergists and Additives from Botanical Medicines
Journal of Natural Products, Britton, Emily R., Kellogg, Joshua, Kvalheim, Olav M., Cech, Nadja B., 2018

Neuroprotective role of the ron receptor tyrosine kinase underlying central nervous system inflammation in health and disease
Frontiers in immunology, Dey, Adwitia, Allen, Joselyn N., Fraser, James W., Snyder, Lindsay M., Tian, Yuan, Zhang, Limin, Paulson, Robert F., Patterson, Andrew, Cantorna, Margherita T., Hankey-Giblin, Pamela A., 2018

The gut microbiota regulates endocrine vitamin D metabolism through fibroblast growth factor 23
Frontiers in immunology, Bora, Stephanie A., Kennett, Mary J., Smith, Philip B., Patterson, Andrew D., Cantorna, Margherita T., 2018

A single mechanosensitive channel protects Francisella tularensis subsp. holarctica from hypoosmotic shock and promotes survival in the aquatic environment
Applied and environmental microbiology, Williamson, David R., Dewan, Kalyan K., Patel, Tanmay, Wastella, Catherine M., Ning, Gang, Kirimanjeswara, Girish S., 2018

Selenium and Selenoproteins in Gut Inflammation-A Review.
Antioxidants (Basel, Switzerland), Nettleford, S, Prabhu, Kumble, 2018

Infectious dose-dependent accumulation of live highly pathogenic avian influenza H5N1 virus in chicken skeletal muscle—implications for public health
Zoonoses and Public Health, Vasudevan, G., Vanamayya, P. R., Nagarajan, S., Rajukumar, K., Suba, S., Venketash, G., Tosh, C., Sood, R., Nissly, R. H., Kuchipudi, Suresh Varma, 2018

Allelic variants of the aryl hydrocarbon receptor differentially influence UVB-mediated skin inflammatory responses in SKH1 mice
Toxicology, Smith, Kayla J., Murray, Iain Alexander, Boyer, Jacob A., Perdew, Gary H., 2018

Replication study
eLife, Vanden Heuvel, John P., Maddox, Ewa, Maalouf, Samar W., Iorns, Elizabeth, Tsui, Rachel, Denis, Alexandria, Perfito, Nicole, Errington, Timothy M., 2018

The intricate role of selenium and selenoproteins in erythropoiesis
Free Radical Biology and Medicine, Liao, Chang, Carlson, Bradley A., Paulson, Robert F., Prabhu, K. Sandeep, 2018

Attenuation of microbiotal dysbiosis and hypertension in a CRISPR/Cas9 gene ablation rat model of GPER1
Hypertension, Waghulde, Harshal, Cheng, Xi, Galla, Sarah, Mell, Blair, Cai, Jingwei, Pruett-Miller, Shondra M., Vazquez, Guillermo, Patterson, Andrew, Kumar, Matam Vijay, Joe, Bina, 2018

Potential role of the mitochondria as a target for the hepatotoxic effects of (-)-epigallocatechin-3-gallate in mice
Food and Chemical Toxicology, James, Karma D., Kennett, Mary J., Lambert, Joshua D., 2018

Retinoic acid mediated clearance of Citrobacter rodentium in vitamin A deficient mice requires CD11b+ and T cells
Frontiers in immunology, Snyder, Lindsay, McDaniel, Kaitlin, Tian, Yuan, Wei, Cheng-Hsin, Kennett, Mary, Patterson, Andrew, Ross, A Catharine, None, Cantorna, Margherita, 2018

Preoperative urine culture is unnecessary in asymptomatic men prior to prostate needle biopsy
International Urology and Nephrology, Qi, David Z., Lehman, Kathleen, Dewan, Kalyan, Kirimanjeswara, Girish Soorapp, Raman, Jay, 2018

In vivo genome-wide binding interactions of mouse and human constitutive androstane receptors reveal novel gene targets
Nucleic acids research, Niu, Ben, Coslo, Denise M., Bataille, Alain R., Albert, Istvan, Pugh, Benjamin Franklin, Omiecinski, Curtis John, 2018

Leveraging putative enhancer-promoter interactions to investigate two-way epistasis in type 2 diabetes GWAS
Pacific Symposium on Biocomputing, Manduchi, E, Chesi, A, Hall, Molly, Grant, SFA, Moore, J, 2018

Assessment of Ah receptor transcriptional activity mediated by halogenated dibenzo-p-dioxins and dibenzofurans (PXDD/Fs) in human and mouse cell systems
Journal of Environmental Science and Health - Part A Toxic/Hazardous Substances and Environmental Engineering, Organtini, Kari L., Hubbard, Troy D., Perdew, Gary H., Dorman, Frank L., 2017

PLATO software provides analytic framework for investigating complexity beyond genome-wide association studies
Nature communications, Hall, Molly A., Wallace, John, Lucas, Anastasia, Kim, Dokyoon, Basile, Anna O., Verma, Shefali S., McCarty, Cathy A., Brilliant, Murray H., Peissig, Peggy L., Kitchner, Terrie E., Verma, Anurag, Pendergrass, Sarah A., Dudek, Scott M., Moore, Jason H., Ritchie, Marylyn D., 2017

Development of a novel Francisella tularensis live vaccine strain expressing ovalbumin provides insight into antigen-specific CD8+ T cell responses
PloS one, Place, David E., Williamson, David R., Yuzefpolskiy, Yevgeniy, Katkere, Bhuvana, Sarkar, Surojit, Kalia, Vandana, Kirimanjeswara, Girish S., 2017

Protective efficacy of influenza group 2 hemagglutinin stem-fragment immunogen vaccines
npj Vaccines, Sutton, Troy C., Chakraborty, Saborni, Mallajosyula, Vamsee V.A., Lamirande, Elaine W., Ganti, Ketaki, Bock, Kevin W., Moore, Ian N., Varadarajan, Raghavan, Subbarao, Kanta, 2017

In vitro neutralization is not predictive of prophylactic efficacy of broadly neutralizing monoclonal antibodies CR6261 and CR9114 against lethal H2 influenza virus challenge in mice
Journal of virology, Sutton, Troy, Lamirande, Elaine W., Bock, Kevin W., Moore, Ian N., Koudstaal, Wouter, Rehman, Muniza, Weverling, Gerrit Jan, Goudsmit, Jaap, Subbarao, Kanta, 2017

Ligand-mediated cytoplasmic retention of the Ah receptor inhibits macrophage-mediated acute inflammatory responses
Laboratory Investigation, Muku, Gulsum E., Lahoti, Tejas S., Murray, Iain A., Podolsky, Michael A., Smith, Kayla J., Hubbard, Troy D., Kuzu, Guray, Gowda, Krishne, Amin, Shantu G., Perdew, Gary H., 2017

Early detection of Mycobacterium avium subsp. paratuberculosis infection in cattle with multiplex-bead based immunoassays
PloS one, Li, Lingling, Wagner, Bettina, Freer, Heather, Schilling, Megan, Bannantine, John P., Campo, Joseph J., Katani, Robab, Grohn, Yrjo T., Radzio-Basu, Jessica, Kapur, Vivek, 2017

Perfluorooctane sulfonate-induced hepatic steatosis in male sprague dawley rats is not attenuated by dietary choline supplementation
Toxicological Sciences, Bagley, Bradford D., Chang, Shu Ching, Ehresman, David J., Eveland, Alan, Zitzow, Jeremiah D., Parker, George A., Peters, Jeffrey Maurice, Wallace, Kendall B., Butenhoff, John L., 2017

Seroprevalence and risk factors of glanders in working equines – Findings of a cross-sectional study in Punjab province of Pakistan
Acta Tropica, Ghori, Muhammad Taslim, Khan, Muhammad Sarwar, Khan, Jawaria Ali, Rabbani, Masood, Shabbir, Muhammad Zubair, Chaudhry, Haroon Rashid, Ali, Muhammad Asad, Muhammad, Javed, Elschner, Mandy Carolina, Jayarao, Bhushan M., 2017

Selenium supplementation through Se-rich dietary matrices can upregulate the anti-inflammatory responses in lipopolysaccharide-stimulated murine macrophages
Food and Agricultural Immunology, Dhanjal, Noorpreet Inder kaur, Sharma, Siddharth, Prabhu, K. Sandeep, Tejo Prakash, N., 2017

Activation of intestinal hypoxia-inducible factor 2α during obesity contributes to hepatic steatosis
Nature Medicine, Xie, Cen, Yagai, Tomoki, Luo, Yuhong, Liang, Xianyi, Chen, Tao, Wang, Qiong, Sun, Dongxue, Zhao, Jie, Ramakrishnan, Sadeesh K., Sun, Lulu, Jiang, Chunmei, Xue, Xiang, Tian, Yuan, Krausz, Kristopher W., Patterson, Andrew David, Shah, Yatrik M., Wu, Yue, Jiang, Changtao, Gonzalez, Frank J., 2017

Conventional and accelerated-solvent extractions of green tea (camellia sinensis) for metabolomics-based chemometrics
Journal of Pharmaceutical and Biomedical Analysis, Kellogg, Joshua J., Wallace, Emily D., Graf, Tyler N., Oberlies, Nicholas H., Cech, Nadja B., 2017

Intermittent Fasting Promotes White Adipose Browning and Decreases Obesity by Shaping the Gut Microbiota
Cell Metabolism, Li, Guolin, Xie, Cen, Lu, Siyu, Nichols, Robert G., Tian, Yuan, Li, Licen, Patel, Daxeshkumar, Ma, Yinyan, Brocker, Chad N., Yan, Tingting, Krausz, Kristopher W., Xiang, Rong, Gavrilova, Oksana, Patterson, Andrew David, Gonzalez, Frank J., 2017

An immuno-chromatographic lateral flow assay (LFA) for rapid on-the-farm detection of classical swine fever virus (CSFV)
Archives of Virology, Sambandam, Rathnapraba, Angamuthu, Raja, Kanagaraj, Vijayarani, Kathaperumal, Kumanan, Chothe, Shubhada K., Nissly, Ruth H., Barry, Rhiannon M., Jayarao, Bhushan M., Kuchipudi, Suresh Varma, 2017

Four-week dietary supplementation with 10- and/or 15-fold basal choline caused decreased body weight in Sprague Dawley rats
Toxicology and Industrial Health, Bagley, Bradford D., Chang, Shu Ching, Ehresman, David J., Eveland, Alan, Parker, George A., Peters, Jeffrey M., Butenhoff, John L., 2017

Evaluation of the biological properties and cross-reactive antibody response to h10 influenza viruses in ferrets
Journal of virology, Sutton, Troy C., Lamirande, Elaine W., Czako, Rita, Subbarao, Kanta, 2017

PPARβ/δ and PPARγ inhibit melanoma tumorigenicity by modulating inflammation and apoptosis
Toxicological Sciences, Borland, Michael G., Yao, Pei Li, Kehres, Ellen M., Lee, Christina, Pritzlaff, Amanda M., Ola, Elizabeth, Wagner, Ashley L., Shannon, Brooke E., Albrecht, Prajakta P., Zhu, Bokai, Kang, Boo Hyon, Robertson, Gavin P., Gonzalez, Frank J., Peters, Jeffrey M., 2017

Dietary broccoli impacts microbial community structure and attenuates chemically induced colitis in mice in an Ah receptor dependent manner
Journal of Functional Foods, Hubbard, Troy D., Murray, Iain Alexander, Nichols, Robert G., Cassel, Kaitlyn, Podolsky, Michael, Kuzu, Guray, Tian, Yuan, Smith, Philip B., Kennett, Mary J., Patterson, Andrew David, Perdew, Gary H., 2017

ER stress and distinct outputs of the IRE1α RNase control proliferation and senescence in response to oncogenic Ras
Proceedings of the National Academy of Sciences of the United States of America, Blazanin, Nicholas, Son, Jeongin, Craig-Lucas, Alayna B., John, Christian L., Breech, Kyle J., Podolsky, Michael A., Glick, Adam B., 2017

Defective anti-polysaccharide IgG vaccine responses in IgA deficient mice
Vaccine, Furuya, Yoichi, Kirimanjeswara, Girish S., Roberts, Sean, Racine, Rachael, Wilson-Welder, Jennifer, Sanfilippo, Alan M., Salmon, Sharon L., Metzger, Dennis W., 2017

Perinatal bisphenol a exposure induces chronic inflammation in rabbit offspring via modulation of gut bacteria and their metabolites
mSystems, Reddivari, Lavanya, Veeramachaneni, D. N.Rao, Walters, William A., Lozupone, Catherine, Palmer, Jennifer, Hewage, M. Kurundu, Bhatnagar, Rohil, Amir, Amnon, Kennett, Mary J., Knight, Rob, Vanamalae, Jairam K.P., 2017

Identification of sero-reactive antigens for the early diagnosis of Johne’s disease in cattle
PloS one, Li, Lingling, Bannantine, John P., Campo, Joseph J., Randall, Arlo, Grohn, Yrjo T., Katani, Robab, Schilling, Megan, Radzio-Basu, Jessica, Kapur, Vivek, 2017

A Retrospective Study of Salmonella Enteritidis Isolated from Commercial Layer Flocks
Avian diseases, Denagamage, Thomas N., Jayarao, Bhushan M., Wallner-Pendleton, Eva A., Patterson, Paul H., Kariyawasam, Subhashinie, 2017

Longitudinal relationship between fecal culture, fecal quantitative PCR, and milk ELISA in Mycobacterium avium ssp. paratuberculosis-infected cows from low-prevalence dairy herds
Journal of dairy science, Beaver, A., Sweeney, R. W., Hovingh, Ernest Peter, Wolfgang, D. R., Gröhn, Y. T., Schukken, Y. H., 2017

GATA Factor-Regulated Samd14 Enhancer Confers Red Blood Cell Regeneration and Survival in Severe Anemia
Developmental Cell, Hewitt, Kyle J., Katsumura, Koichi R., Matson, Daniel R., Devadas, Prithvia, Tanimura, Nobuyuki, Hebert, Alexander S., Coon, Joshua J., Kim, Jin Soo, Dewey, Colin N., Keles, Sunduz, Hao, Siyang, Paulson, Robert F., Bresnick, Emery H., 2017

Procedural povidone iodine rectal preparation reduces bacteriuria and bacteremia following prostate needle biopsy
Canadian Journal of Urology, Allen, Jordan L., Lehman, Kathleen, Dewan, Kalyan, Kirimanjeswara, Girish Soorapp, Raman, Jay, 2017

Orthogonal comparison of GC-MS and 1H NMR spectroscopy for short chain fatty acid quantitation
Analytical Chemistry, Cai, Jingwei, Zhang, Jingtao, Tian, Yuan, Zhang, Limin, Hatzakis, Emmanuel, Krausz, Kristopher W., Smith, Philip B., Gonzalez, Frank J., Patterson, Andrew David, 2017

Enhanced inflammation in New Zealand white rabbits when MERS-CoV reinfection occurs in the absence of neutralizing antibody
PLoS Pathogens, Houser, Katherine V., Broadbent, Andrew J., Gretebeck, Lisa, Vogel, Leatrice, Lamirande, Elaine W., Sutton, Troy, Bock, Kevin W., Minai, Mahnaz, Orandle, Marlene, Moore, Ian N., Subbarao, Kanta, 2017

Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals
BioData Mining, Holzinger, Emily R., Verma, Shefali S., Moore, Carrie B., Hall, Molly, De, Rishika, Gilbert-Diamond, Diane, Lanktree, Matthew B., Pankratz, Nathan, Amuzu, Antoinette, Burt, Amber, Dale, Caroline, Dudek, Scott, Furlong, Clement E., Gaunt, Tom R., Kim, Daniel Seung, Riess, Helene, Sivapalaratnam, Suthesh, Tragante, Vinicius, Van Iperen, Erik P.A., Brautbar, Ariel, Carrell, David S., Crosslin, David R., Jarvik, Gail P., Kuivaniemi, Helena, Kullo, Iftikhar J., Larson, Eric B., Rasmussen-Torvik, Laura J., Tromp, Gerard, Baumert, Jens, Cruickshanks, Karen J., Farrall, Martin, Hingorani, Aroon D., Hovingh, G. K., Kleber, Marcus E., Klein, Barbara E., Klein, Ronald, Koenig, Wolfgang, Lange, Leslie A., MOrz, Winfried, North, Kari E., Charlotte Onland-Moret, N., Reiner, Alex P., Talmud, Philippa J., Van Der Schouw, Yvonne T., Wilson, James G., Kivimaki, Mika, Kumari, Meena, Moore, Jason H., Drenos, Fotios, Asselbergs, Folkert W., Keating, Brendan J., Ritchie, Marylyn D., 2017

Identification of novel seroreactive antigens in Johne's disease cattle by using the Mycobacterium tuberculosis protein array
Clinical and Vaccine Immunology, Bannantine, John P., Campo, Joseph J., Li, Lingling, Randall, Arlo, Pablo, Jozelyn, Praul, Craig A., Garay, Juan Antonio Raygoza, Stabel, Judith R., Kapur, Vivek, 2017

Mutations in the transmembrane domain and cytoplasmic tail of Hendra virus fusion protein disrupt viruslike- particle assembly
Journal of virology, Cifuentes-Muñoz, Nicolás, Sun, Weina, Ray, Greeshma, Schmitt, Phuong Tieu, Webb, Stacy, Gibson, Kathleen, Dutch, Rebecca Ellis, Schmitt, Anthony P., 2017

Ectopic Expression of Innate Immune Protein, Lipocalin-2, in Lactococcus lactis Protects Against Gut and Environmental Stressors
Inflammatory bowel diseases, Saha, Piu, Chassaing, Benoit, Yeoh, Beng San, Viennois, Emilie, Xiao, Xia, Kennett, Mary J., Singh, Vishal, Vijay-Kumar, Matam, 2017

A Nanostructured Microfluidic Immunoassay Platform for Highly Sensitive Infectious Pathogen Detection
Small, Yu, Xu, Xia, Yiqiu, Tang, Yi, Zhang, Wen Long, Yeh, Yin Ting, Lu, Huaguang, Zheng, Si Yang, 2017

Deciphering the landscape of host barriers to Listeria monocytogenes infection.
Proceedings of the National Academy of Sciences of the United States of America, Zhang, T, Abel, Soeren, Abel- zur Wiesch, Pia Karoline, Sasabe, J, Davis, B, Higgins, D, Waldor, M, 2017

Development of an alternative modified live influenza B virus vaccine
Journal of virology, Santos, Jefferson J.S., Finch, Courtney, Sutton, Troy, Obadan, Adebimpe, Aguirre, Isabel, Wan, Zhimin, Lopez, Diego, Geiger, Ginger, Gonzalez-Reiche, Ana Silvia, Ferreri, Lucas, Perez, Daniel R., 2017

Comparative diagnostic efficacy of recombinant LLO and PI-PLC-based ELISAs for detection of listeriosis in animals
Journal of Microbiological Methods, Suryawanshi, Rahul D., Malik, Satya Veer Singh, Jayarao, Bhushan M., Chaudhari, Sandeep P., Savage, Emily, Vergis, Jess, Kurkure, Nitin V., Barbuddhe, Sukhadeo B., Rawool, Deepak B., 2017

Bioactive growth hormone in older men and women
Growth Hormone and IGF Research, Kraemer, William J., Kennett, Mary J., Mastro, Andrea M., McCarter, Roger J., Rogers, Connie J., DuPont, William H., Flanagan, Shawn D., Turbitt, William J., Fragala, Maren S., Post, Emily M., Hymer, Wesley C., 2017

Comparison of Metabolomics Approaches for Evaluating the Variability of Complex Botanical Preparations
Journal of Natural Products, Kellogg, Joshua J., Graf, Tyler N., Paine, Mary F., McCune, Jeannine S., Kvalheim, Olav M., Oberlies, Nicholas H., Cech, Nadja B., 2017

Indoleamine 2,3-dioxygenase 1 (IDO1) inhibitors activate the aryl hydrocarbon receptor
Toxicology and Applied Pharmacology, Moyer, Benjamin J., Rojas, Itzel Y., Murray, Iain A., Lee, Seokwon, Hazlett, Haley F., Perdew, Gary H., Tomlinson, Craig R., 2017

Reduced competitive repopulation capacity of multipotential hematopoietic stem cells in the bone marrow of friend virus-infected Fv2-resistant mice
In Vivo, Epperly, Michael W., Zhang, Xichen, Fisher, Renee, Hou, Wen, Franicola, Darcy, Shields, Donna, Quickel, Michael, Hankey-Giblin, Pamela, Wang, Hong, Greenberger, Joel S., 2017

Peroxisome proliferator-activated receptor-β/δ inhibits human neuroblastoma cell tumorigenesis by inducing p53- and SOX2-mediated cell differentiation
Molecular Carcinogenesis, Yao, Pei Li, Chen, Liping, Dobrzański, Tomasz P., Zhu, Bokai, Kang, Boo Hyon, Müller, Rolf, Gonzalez, Frank J., Peters, Jeffrey M., 2017

Estrogen modulates mesenchyme-epidermis interactions in the adult nipple
Development (Cambridge), Wu, Hsing Jung, Oh, Ji Won, Spandau, Dan F., Tholpady, Sunil, Diaz, Jesus, Schroeder, Laura J., Offutt, Carlos D., Glick, Adam B., Plikus, Maksim V., Koyama, Sachiko, Foley, John, 2017

Isolation, characterization, and purification of macrophages from tissues affected by obesity-related inflammation
Journal of Visualized Experiments, Allen, Joselyn N., Dey, Adwitia, Nissly, Ruth, Fraser, James, Yu, Shan, Balandaram, Gayathri, Peters, Jeffrey M., Hankey-Giblin, Pamela A., 2017

Peroxisome proliferator-activated receptor-β/δ modulates mast cell phenotype
Immunology, Yao, Pei Li, Morales, Jose L., Gonzalez, Frank J., Peters, Jeffrey M., 2017

Activation of PPARγ by endogenous prostaglandin J2 mediates the antileukemic effect of selenium in murine leukemia
Blood, Finch, Emily R., Tukaramrao, Diwakar B., Goodfield, Laura L., Quickel, Michael D., Paulson, Robert F., Prabhu, K. Sandeep, 2017

Intestinal Farnesoid X Receptor Signaling Modulates Metabolic Disease
Digestive Diseases, Gonzalez, Frank J., Jiang, Changtao, Xie, Cen, Patterson, Andrew D., 2017

Modulation of urinary siderophores by the diet, gut microbiota and inflammation in mice
Journal of Nutritional Biochemistry, Xiao, Xia, Yeoh, Beng San, Saha, Piu, Tian, Yuan, Singh, Vishal, Patterson, Andrew D., Vijay-Kumar, Matam, 2017

Differentiated state of initiating tumor cells is key to distinctive immune responses seen in H-RasG12V-induced squamous tumors
Cancer Immunology Research, Podolsky, Michael A., Bailey, Jacob T., Gunderson, Andrew J., Oakes, Carrie J., Breech, Kyle, Glick, Adam B., 2017

Evaluation of Three Bacterial Identification Systems for Species Identification of Bacteria Isolated from Bovine Mastitis and Bulk Tank Milk Samples.
Foodborne pathogens and disease, Savage, E, Chothe, S, Lintner, V, Pierre, T, Matthews, T, Kariyawasam, Subhashinie, Miller, Douglas, Tewari, D, Jayarao, Bhushan, 2017

A nanowell-based QCM aptasensor for rapid and sensitive detection of avian influenza virus
Sensors and Actuators, B: Chemical, Wang, Ronghui, Wang, Lijun, Callaway, Zachary T., Lu, Huaguang, Huang, Tony Jun, Li, Yanbin, 2017

An intestinal farnesoid x receptor-ceramide signaling axis modulates hepatic gluconeogenesis in mice
Diabetes, Xie, Cen, Jiang, Changtao, Shi, Jingmin, Gao, Xiaoxia, Sun, Dongxue, Sun, Lulu, Wang, Ting, Takahashi, Shogo, Anitha, Mallappa, Krausz, Kristopher W., Patterson, Andrew David, Gonzalez, Frank J., 2017

Potential therapeutic targets of Guggulsterone in cancer.
Nutrition & metabolism, Bhat, A, Prabhu, Kumble, Kuttikrishnan, S, Krishnankutty, R, Babu, J, Mohammad, R, Uddin, S, 2017

Label-Free Virus Capture and Release by a Microfluidic Device Integrated with Porous Silicon Nanowire Forest
Small, Xia, Yiqiu, Tang, Yi, Yu, Xu, Wan, Yuan, Chen, Yizhu, Lu, Huaguang, Zheng, Si Yang, 2017

The aryl hydrocarbon receptor as a moderator of host-microbiota communication.
Current opinion in toxicology, 2017

Induction of protective immunity against influenza A/Jiangxi-Donghu/346/2013 (H10N8) in mice
Journal of General Virology, Kuah, Li Fang, Tang, Lay Hoon, Sutton, Troy, Lim, Jie Hui, Sin, Wan Ling, Lamirande, Elaine, Subbarao, Kanta, Lau, Yuk Fai, 2017

Identifying gene–gene interactions that are highly associated with four quantitative lipid traits across multiple cohorts
Human genetics, De, Rishika, Verma, Shefali S., Holzinger, Emily, Hall, Molly, Burt, Amber, Carrell, David S., Crosslin, David R., Jarvik, Gail P., Kuivaniemi, Helena, Kullo, Iftikhar J., Lange, Leslie A., Lanktree, Matthew B., Larson, Eric B., North, Kari E., Reiner, Alex P., Tragante, Vinicius, Tromp, Gerard, Wilson, James G., Asselbergs, Folkert W., Drenos, Fotios, Moore, Jason H., Ritchie, Marylyn D., Keating, Brendan, Gilbert-Diamond, Diane, 2017

Control of circulating IgE by the Vitamin D receptor in vivo involves B cell intrinsic and extrinsic mechanisms
Journal of Immunology, James, Jamaal, Weaver, Veronika, Cantorna, Margherita T., 2017

Informatics and Data Analytics to Support Exposome-Based Discovery for Public Health
ANNUAL REVIEW OF PUBLIC HEALTH, VOL 38, Manrai, Arjun, Cui, Yuxia, Bushel, Pierre, Hall, Molly, Karakitsios, Spyros, Mattingly, Carolyn, Ritchie, Marylyn, Schmitt, Charles, Sarigiannis, Denis, Thomas, Duncan, Wishart, David, Balshaw, David, Patel, Chirag, 2017

Competition between influenza A virus subtypes through heterosubtypic immunity modulates re-infection and antibody dynamics in the mallard duck
PLoS pathogens, Latorre-Margalef, Neus, Brown, Justin D., Fojtik, Alinde, Poulson, Rebecca L., Carter, Deborah, Franca, Monique, Stallknecht, David E., 2017

SKI-178: A multitargeted inhibitor of sphingosine kinase and microtubule dynamics demonstrating therapeutic efficacy in acute myeloid leukemia models
Cancer Translational Medicine, Hengst, Jeremy, Dick, Taryn E., Sharma, Arati, Doi, Kenichiro, Hegde, Shailaja, Tan, Su Fern, Geffert, Laura, Fox, Todd E., Sharma, Arun K., Desai, Dhimant, Amin, Shantu, Kester, Mark, Loughran, Thomas P., Paulson, Robert, Claxton, David, Wang, Hong-Gang, Yun, Jong, 2017

Co-expression of sialic acid receptors compatible with avian and human influenza virus binding in emus (Dromaius novaehollandiae)
Virology, Gujjar, Naveen, Chothe, Shubhada K., Gawai, Shashikant, Nissly, Ruth, Bhushan, Gitanjali, Kanagaraj, Vijayarani, Jayarao, Bhushan M., Kathaperumal, Kumanan, Subbiah, Madhuri, Kuchipudi, Suresh Varma, 2017

IL-4 up-regulates cyclooxygenase-1 expression in macrophages
Journal of Biological Chemistry, Shay, Ashley E., Diwakar, Bastihalli T., Guan, Bo Jhih, Narayan, Vivek, Urban, Joseph F., Prabhu, K. Sandeep, 2017

Effects of cranberry extracts on gene expression in THP-1 cells
Food Science and Nutrition, Hannon, Daniel B., Thompson, Jerry T., Khoo, Christina, Juturu, Vijaya, Vanden Heuvel, John P., 2017

Gut microbiota increased by omega-3 fatty acids is negatively correlated with hepatic lipid metabolism-associated genes in mice with high carbohydrate diet-induced steatosis
The FASEB Journal, Huang, Kuan-Hsun, Nichols, Robert, Sebastian, Aswathy, Albert, Istvan, Patterson, Andrew, Ross, A Catharine, None, 2017

Lipid emulsion added to a liquid high-carbohydrate diet and voluntary running exercise reduce lipogenesis and ameliorate early-stage hepatic steatosis in mice
Journal of Nutrition, Huang, Kuan Hsun, Hao, Lei, Smith, Philip B., Rogers, Connie J., Patterson, Andrew D., Ross, A. Catharine, 2017

The role of UVR and Vitamin D on T cells and inflammatory bowel disease
Photochemical and Photobiological Sciences, Bora, Stephanie, Cantorna, Margherita T., 2017

Lipopolysacharide gene based development and optimization of diagnostics for francisella tularensis
Journal of Animal and Plant Sciences, Muhammad, J., Rabbani, M., Muhammad, K., Wasim, M., Dewan, K., Anjum, A. A., Sheikh, A. A., Ahmad, A., Akhtar, F., Nisar, M., Jayarao, B. M., Kirimanjeswara, G. S., 2017

The Regulation of Pathways of Inflammation and Resolution in Immune Cells and Cancer Stem Cells by Selenium.
Advances in cancer research, Diwakar, B, Korwar, A, Paulson, Robert, Prabhu, Kumble, 2017

Modulation of urinary siderophores by the diet, gut microbiota and inflammation in mice.
The Journal of nutritional biochemistry, Xiao, X, Yeoh, B, Saha, Piu, Tian, Y, Singh, V, Patterson, Andrew, Vijay-Kumar, M, 2016

Therapeutic potential of GW501516 and the role of Peroxisome proliferator-activated receptor β/δ and B-cell lymphoma 6 in inflammatory signaling in human pancreatic cancer cells
Biochemistry and Biophysics Reports, Smith, Russell W., Coleman, Jeffrey D., Thompson, Jerry T., Vanden Heuvel, John Patrick, 2016

Regulation of cytochrome P450 2B10 (CYP2B10) expression in liver by peroxisome proliferator-activated receptor-β/δ modulation of SP1 promoter occupancy
Journal of Biological Chemistry, Koga, Takayuki, Yao, Pei Li, Goudarzi, Maryam, Murray, Iain A., Balandaram, Gayathri, Gonzalez, Frank J., Perdew, Gary H., Fornace, Albert J., Peters, Jeffrey M., 2016

Biliverdin reductase A attenuates hepatic steatosis by inhibition of Glycogen Synthase Kinase (GSK) 3β phosphorylation of serine 73 of Peroxisome Proliferator-activated Receptor (PPAR) α
Journal of Biological Chemistry, Hinds, Terry D., Burns, Katherine A., Hosick, Peter A., McBeth, Lucien, Nestor-Kalinoski, Andrea, Drummond, Heather A., Alamodi, Abdulhadi A., Hankins, Michael W., Vanden Heuvel, John P., Stec, David E., 2016

Selenoprotein gene nomenclature
Journal of Biological Chemistry, Regina, Brigelius Flohé, Gladyshev, Vadim N., Arnér, Elias S., Berry, Marla J., Bruford, Elspeth A., Burk, Raymond F., Carlson, Bradley A., Castellano, Sergi, Chavatte, Laurent, Conrad, Marcus, Copeland, Paul R., Diamond, Alan M., Driscoll, Donna M., Ferreiro, Ana, Flohé, Leopold, Green, Fiona R., Guigó, Roderic, Handy, Diane E., Hatfield, Dolph L., Hesketh, John, Hoffmann, Peter R., Holmgren, Arne, Hondal, Robert J., Howard, Michael T., Huang, Kaixun, Kim, Hwa Young, Kim, Ick Young, Köhrle, Josef, Krol, Alain, Kryukov, Gregory V., Lee, Byeong Jae, Lee, Byung Cheon, Lei, Xin Gen, Liu, Qiong, Lescure, Alain, Lobanov, Alexei V., Loscalzo, Joseph, Maiorino, Matilde, Mariotti, Marco, Prabhu, K. Sandeep, Rayman, Margaret P., Rozovsky, Sharon, Salinas, Gustavo, Schmidt, Edward E., Schomburg, Lutz, Schweizer, Ulrich, Simonović, Miljan, Sunde, Roger A., Tsuji, Petra A., Tweedie, Susan, Ursini, F. Fulvio, Whanger, Philip D., Zhang, Yan, 2016

Evidence of Coxiella burnetii in Punjab province, Pakistan
Acta Tropica, Shabbir, Muhammad Zubair, Akram, Sidra, Hassan, Zia ul, Hanif, Kashif, Rabbani, Masood, Muhammad, Javed, Chaudhary, Muhammad Hamid, Abbas, Tariq, Ghori, Muhammad Taslim, Rashid, Haroon, Jamil, Tariq, Islam, Zia ul, Rasool, Haisem, Bano, Asghari, Ahmad, Arfan, Ali, Muhammad Asad, Yaqub, Tahir, McVey, Jr., Walter Roland, Jayarao, Bhushan M., 2016

An Intestinal Microbiota-Farnesoid X Receptor Axis Modulates Metabolic Disease.
Gastroenterology, 2016

Activation of the Constitutive Androstane Receptor by Monophthalates
Chemical research in toxicology, Laurenzana, Elizabeth M., Coslo, Denise M., Vigilar, M. Veronica, Roman, Anthony M., Omiecinski, Curtis J., 2016

Escherichia coli Braun Lipoprotein (BLP) exhibits endotoxemia - Like pathology in Swiss albino mice
Scientific reports, Lakshmikanth, Chikkamenahalli Lakshminarayana, Jacob, Shancy Petsel, Kudva, Avinash Kundadka, Latchoumycandane, Calivarathan, Yashaswini, Puttaraju Srikanta Murthy, Sumanth, Mosale Seetharam, Goncalves-De-Albuquerque, Cassiano F., Silva, Adriana R., Singh, Sridevi Annapurna, Castro-Faria-Neto, Hugo C., Prabhu, Sandeep Kumble, McIntyre, Thomas M., Marathe, Gopal Kedihithlu, 2016

Divergent Ah Receptor Ligand Selectivity during Hominin Evolution
Molecular Biology and Evolution, Hubbard, Troy D., Murray, Iain Alexander, Bisson, William H., Sullivan, Alexis P., Sebastian, Aswathy, Perry, George H., Jablonski, Nina G., Perdew, Gary H., 2016

DNA from dust: Comparative genomics of large DNA viruses in field surveillance samples
mSphere, Pandey, Utsav, Bell, Andrew, Renner, Daniel, Kennedy, David, Shreve, Jacob, Cairns, Chris, Jones, Matthew, Dunn, Patricia, Read, Andrew, Szpara, Moriah, 2016

Rapid detection of avian influenza virus H5N1 in chicken tracheal samples using an impedance aptasensor with gold nanoparticles for signal amplification
Journal of Virological Methods, Karash, Sardar, Wang, Ronghui, Kelso, Lisa, Lu, Huaguang, Huang, Tony Jun, Li, Yanbin, 2016

Expression of the aryl hydrocarbon receptor contributes to the establishment of intestinal microbial community structure in mice
Scientific reports, Murray, Iain A., Nichols, Robert G., Zhang, Limin, Patterson, Andrew D., Perdew, Gary H., 2016

Review of Nonfoodborne Zoonotic and Potentially Zoonotic Poultry Diseases
Avian Diseases, Agunos, Agnes, Pierson, F., Lungu, Bwalya, Dunn, Patricia, Tablante, Nathaniel, 2016

Antimicrobial fungal endophytes from the botanical medicine goldenseal (Hydrastis canadensis)
Phytochemistry Letters, Egan, Joseph M., Kaur, Amninder, Raja, Huzefa A., Kellogg, Joshua J., Oberlies, Nicholas H., Cech, Nadja B., 2016

Epistatic Gene-Based Interaction Analyses for Glaucoma in eMERGE and NEIGHBOR Consortium
PLoS genetics, Verma, Shefali Setia, Cooke Bailey, Jessica N., Lucas, Anastasia, Bradford, Yuki, Linneman, James G., Hauser, Michael A., Pasquale, Louis R., Peissig, Peggy L., Brilliant, Murray H., McCarty, Catherine A., Haines, Jonathan L., Wiggs, Janey L., Vrabec, Tamara R., Tromp, Gerard, Ritchie, Marylyn D., Bickel, Jonathan, Chandler, Ariel, Holm, Ingrid, Kohane, Isaac, Manzi, Shannon, Markianos, Kyriacos, Palmer, Nathan, Perry, Cassandra, Savova, Guergana, Wolf, Wendy, Wong Kong, Sek, Antommaria, Armand, Cobb, Beth, Harley, John, Hutton, John, Lingren, Todd, Lynch, John, Marsolo, Keith, Myers, Melanie, Namjou, Bahram, Prows, Cindy, Solti, Imre, Vinks, Sander, Wagner, Michael, Abrams, Debbie, Almoguera, Berta, Chiavacci, Rosetta, Connolly, John, Devoto, Marcella, Hakonarson, Hakon, Keating, Brendan, Kim, Cecilia, Mentch, Frank, Qui, Haijun, Sleiman, Patrick, 2016

Perfluorooctane sulfonate-choline ion pair formation
Toxicological Sciences, Zhang, Limin, Krishnan, Prasad, Ehresman, David J., Smith, Philip B., Dutta, Mainak, Bagley, Bradford D., Chang, Shu Ching, Butenhoff, John L., Patterson, Andrew D., Peters, Jeffrey M., 2016

Metabolomics reveals altered lipid metabolism in a mouse model of endometriosis
Journal of Proteome Research, Dutta, Mainak, Anitha, Mallappa, Smith, Philip B., Chiaro, Christopher R., Maan, Meenu, Chaudhury, Koel, Patterson, Andrew David, 2016

Assessment of an application for touchscreen devices to record calving-related events in dairy herds and monitor personnel performance
Journal of dairy science, Barragan, A. A., Workman, J. D., Bas, S., Proudfoot, K. L., Schuenemann, G. M., 2016

A novel AhR ligand, 2AI, protects the retina from environmental stress
Scientific reports, Gutierrez, Mark A., Davis, Sonnet S., Rosko, Andrew, Nguyen, Steven M., Mitchell, Kylie P., Mateen, Samiha, Neves, Joana, Garcia, Thelma Y., Mooney, Shaun, Perdew, Gary H., Hubbard, Troy D., Lamba, Deepak A., Ramanathan, Arvind, 2016

The ron receptor tyrosine kinase regulates macrophage heterogeneity and plays a protective role in diet-induced obesity, atherosclerosis, and hepatosteatosis
Journal of Immunology, Yu, Shan, Allen, Joselyn N., Dey, Adwitia, Zhang, Limin, Balandaram, Gayathri, Kennett, Mary J., Xia, Mingcan, Xiong, Na, Peters, Jeffrey Maurice, Patterson, Andrew David, Giblin, Pamela Hankey, 2016

A retrospective study of causes of skin lesions in wild turkeys (Meleagris gallopavo) in the Eastern USA, 1975–2013
Journal of wildlife diseases, Elsmo, Elizabeth J., Allison, Andrew B., Brown, Justin D., 2016

Registered report
eLife, Vanden Heuvel, John P., Bullenkamp, Jessica, Iorns, Elizabeth, Gunn, William, Tan, Fraser, Lomax, Joelle, Perfito, Nicole, Errington, Timothy, 2016

IBD: Vitamin D and IBD: moving towards clinical trials.
Nature reviews. Gastroenterology & hepatology, Cantorna, Margherita, 2016

Inhibitors of ribosome rescue arrest growth of francisella tularensis at all stages of intracellular replication
Antimicrobial Agents and Chemotherapy, Goralski, Tyler D.P., Dewan, Kalyan K., Alumasa, John, Avanzato, Victoria, Place, David E., Markley, Rachel L., Katkere, Bhuvana, Rabadi, Seham M., Bakshi, Chandra Shekhar, Keiler, Kenneth Charles, Kirimanjeswara, Girish Soorapp, 2016

Genetic analysis of Vibrio parahaemolyticus intestinal colonization.
Proceedings of the National Academy of Sciences of the United States of America, Hubbard, T, Chao, M, Abel, Soeren, Blondel, C, Abel- zur Wiesch, Pia Karoline, Zhou, X, Davis, B, Waldor, M, 2016

Effects of cranberry extracts on gene expression in THP-1 cells.
Food science & nutrition, Hannon, D, Thompson, Jerry, Khoo, C, Juturu, V, Vanden Heuvel, John, 2016

Detection and characterization of two co-infection variant strains of avian orthoreovirus (ARV) in young layer chickens using next-generation sequencing (NGS)
Scientific reports, Tang, Yi, Lin, Lin, Sebastian, Aswathy, Lu, Huaguang, 2016

Epigallocatechin-3-gallate inhibition of myeloperoxidase and its counter-regulation by dietary iron and lipocalin 2 in murine model of gut inflammation
American Journal of Pathology, Yeoh, Beng San, Aguilera Olvera, Rodrigo, Singh, Vishal, Xiao, Xia, Kennett, Mary J., Joe, Bina, Lambert, Joshua D., Vijay-Kumar, Matam, 2016

Optimizing Surveillance for South American Origin Influenza A Viruses Along the United States Gulf Coast Through Genomic Characterization of Isolates from Blue-winged Teal (Anas discors)
Transboundary and Emerging Diseases, Ramey, A. M., Walther, P., Link, P., Poulson, R. L., Wilcox, B. R., Newsome, G., Spackman, E., Brown, J. D., Stallknecht, D. E., 2016

Whole genome alignment based one-step real-time RT-PCR for universal detection of avian orthoreoviruses of chicken, pheasant and turkey origins
Infection, Genetics and Evolution, Tang, Yi, Lu, Huaguang, 2016

Chemoproteomic profiling of host and pathogen enzymes active in cholera.
Nature chemical biology, Hatzios, S, Abel, Soeren, Martell, J, Hubbard, T, Sasabe, J, Munera, D, Clark, L, Bachovchin, D, Qadri, F, Ryan, E, Davis, B, Weerapana, E, Waldor, M, 2016

Rapid detection of Escherichia coli O157 and shiga toxins by lateral flow immunoassays
Toxins, Wang, Jinliang, Katani, Robab, Li, Lingling, Hegde, Narasimha, Roberts, Elisabeth L., Kapur, Vivek, DebRoy, Chitrita, 2016

Selenium- Supplement Information
Adv. Nutr., Prabhu, Kumble, Lei, X, 2016

Mass spectrometry-based metabolomics identifies longitudinal urinary metabolite profiles predictive of radiation-induced cancer
Cancer Research, Cook, John A., Chandramouli, Gadisetti V.R., Anver, Miriam R., Sowers, Anastasia L., Thetford, Angela, Krausz, Kristopher W., Gonzalez, Frank J., Mitchell, James B., Patterson, Andrew D., 2016

Inhibition of interleukin-10 signaling induces microbiota-dependent chronic colitis in Apolipoprotein E deficient mice
Inflammatory bowel diseases, Singh, Vishal, Kumar, Manish, San Yeoh, Beng, Xiao, Xia, Saha, Piu, Kennett, Mary J., Kumar, Matam Vijay, 2016

Bortezomib-mediated downregulation of S-phase kinase protein-2 (SKP2) causes apoptotic cell death in chronic myelogenous leukemia cells.
Journal of translational medicine, Iskandarani, A, Bhat, A, Siveen, K, Prabhu, Kumble, Kuttikrishnan, S, Khan, M, Krishnankutty, R, Kulinski, M, Nasr, R, Mohammad, R, Uddin, S, 2016

Impaired recovery from peritoneal inflammation in a mouse model of mild dietary zinc restriction
Molecular Nutrition and Food Research, Phillips, Brett E., Geletzke, Abby K., Smith, Philip B., Podany, Abigail B., Chacon, Alexander, Kelleher, Shannon L., Patterson, Andrew D., Soybel, David I., 2016

Surveillance for pasteurella multocida in ring-necked pheasants (Phasianus colchicus) after an outbreak of avian cholera and apparently successful antibiotic treatment
Avian Diseases, Brown, Justin D., Dunn, Patricia, Wallner-Pendleton, Eva, Kariyawasam, Subhashinie, Schriner, Timothy, Hofacre, Charles, Johnson, Joshua, Boyd, Robert, 2016

Human Cells Require Non-stop Ribosome Rescue Activity in Mitochondria
PLoS Genetics, Feaga, Heather A., Quickel, Michael D., Giblin, Pamela Hankey, Keiler, Kenneth Charles, 2016

Growth in egg yolk enhances salmonella enteritidis colonization and virulence in a mouse model of human colitis
PloS one, Moreau, Matthew R., Wijetunge, Dona Saumya S., Bailey, Megan L., Gongati, Sudharsan R., Goodfield, Laura L., Hewage, Eranda Mangala K.Kurundu, Kennett, Mary J., Fedorchuk, Christine, Ivanov, Yury V., Linder, Jessica E., Jayarao, Bhushan M., Kariyawasam, Subhashinie, 2016

Biochemometrics for Natural Products Research
Journal of Natural Products, Kellogg, Joshua J., Todd, Daniel A., Egan, Joseph M., Raja, Huzefa A., Oberlies, Nicholas H., Kvalheim, Olav M., Cech, Nadja B., 2016

Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis on dairy farms
Annual Review of Animal Biosciences, Li, Lingling, Katani, Robab, Schilling, Megan, Kapur, Vivek, 2016

Selenoprotein expression in macrophages is critical for optimal clearance of parasitic helminth Nippostrongylus brasiliensis
Journal of Biological Chemistry, Nelson, Shakira M., Shay, Ashley E., James, Jamaal L., Carlson, Bradley A., Urban, Joseph F., Prabhu, K. Sandeep, 2016

Antioxidant Drug Tempol Promotes Functional Metabolic Changes in the Gut Microbiota
Journal of Proteome Research, Cai, Jingwei, Zhang, Limin, Jones, Richard A., Correll, Jared B., Hatzakis, Emmanuel, Smith, Philip B., Gonzalez, Frank J., Patterson, Andrew David, 2016

Pathogenicity and tissue tropism of infectious bronchitis virus is associated with elevated apoptosis and innate immune responses
Virology, Chhabra, Rajesh, Kuchipudi, Suresh V., Chantrey, Julian, Ganapathy, Kannan, 2016

C-terminal DxD-containing sequences within paramyxovirus nucleocapsid proteins determine matrix protein compatibility and can direct foreign proteins into budding particles
Journal of virology, Ray, Greeshma, Schmitt, Phuong Tieu, Schmitt, Anthony P., 2016

NMR-based metabolomics and its application in drug metabolism and cancer research
Current Pharmacology Reports, 2016

Vitamin D and lung infection
Infection and Immunity, Cantorna, Margherita T., 2016

Indikatoren für Risiken bei Kühen in der Transitphase - Eine Übersicht zu metabolischen Profilen
Tierarztliche Praxis Ausgabe G: Grosstiere - Nutztiere, Vansaun, Robert John, 2016

Embracing Complex Associations in Common Traits: Critical Considerations for Precision Medicine
TRENDS IN GENETICS, Hall, Molly, Moore, Jason, Ritchie, Marylyn, 2016

Deficiency of stearoyl-CoA desaturase-1 aggravates colitogenic potential of adoptively transferred effector T cells
American Journal of Physiology - Gastrointestinal and Liver Physiology, Yeoh, Beng San, Saha, Piu, Singh, Vishal, Xiao, Xia, Ying, Yun, Vanamala, Jairam K., Kennett, Mary J., Harvatine, Kevin J., Joe, Bina, Vijay-Kumar, Matam, 2016

Environmental stability of swine and human pandemic influenza viruses in water under variable conditions of temperature, salinity, and pH
Applied and environmental microbiology, Poulson, R. L., Tompkins, S. M., Berghaus, R. D., Brown, J. D., Stallknecht, D. E., 2016

DNA from dust: the first field-isolated genomes of MDV-1, from virions in poultry dust and chicken feather follicles
, Pandey, U., Bell, Andrew, Renner, D., Kennedy, David, Shreve, J., Cairns, C., Jones, Matthew, Dunn, Patricia, Read, Andrew, Szpara, Moriah, 2016

Complete genome sequence of SS52, a strain of Escherichia coli O157
Genome Announcements, Katani, Robab, Cote, Rebecca, Garay, Juan Antonio Raygoza, Li, Lingling, Arthur, Terrance M., DebRoy, Chitrita, Mwangi, Michael M., Kapur, Vivek, 2016

Selective programming of CCR10+ innate lymphoid cells in skin-draining lymph nodes for cutaneous homeostatic regulation
Nature Immunology, Yang, Jie, Hu, Shaomin, Zhao, Luming, Kaplan, Daniel H., Perdew, Gary H., Xiong, Na, 2016

Intestine-selective farnesoid X receptor inhibition improves obesity-related metabolic dysfunction
Nature communications, Jiang, Changtao, Xie, Cen, Lv, Ying, Li, Jing, Krausz, Kristopher W., Shi, Jingmin, Brocker, Chad N., Desai, Dhimant, Amin, Shantu G., Bisson, William H., Liu, Yulan, Gavrilova, Oksana, Patterson, Andrew D., Gonzalez, Frank J., 2015

Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR)
BioData Mining, De, Rishika, Verma, Shefali S., Drenos, Fotios, Holzinger, Emily R., Holmes, Michael V., Hall, Molly A., Crosslin, David R., Carrell, David S., Hakonarson, Hakon, Jarvik, Gail, Larson, Eric, Pacheco, Jennifer A., Rasmussen-Torvik, Laura J., Moore, Carrie B., Asselbergs, Folkert W., Moore, Jason H., Ritchie, Marylyn D., Keating, Brendan J., Gilbert-Diamond, Diane, 2015

Kernel approaches for differential expression analysis of mass spectrometry-based metabolomics data
BMC bioinformatics, Zhan, Xiang, Patterson, Andrew David, Ghosh, Debashis, 2015

Early apoptosis of porcine alveolar macrophages limits avian influenza virus replication and pro-inflammatory dysregulation
Scientific reports, Chang, Pengxiang, Kuchipudi, Suresh V., Mellits, Kenneth H., Sebastian, Sujith, James, Joe, Liu, Jinhua, Shelton, Holly, Chang, Kin Chow, 2015

Avian influenza ecology in north atlantic sea ducks
PloS one, Hall, Jeffrey S., Russell, Robin E., Franson, J. Christian, Soos, Catherine, Dusek, Robert J., Allen, R. Bradford, Nashold, Sean W., TeSlaa, Joshua L., Jonsson, Jon Einar, Ballard, Jennifer R., Harms, Naomi Jane, Brown, Justin D., 2015

Incidence of clostridial dermatitis (cellulitis) and factors for development of the disease in turkeys
Journal of Applied Poultry Research, Lighty, Megan, Elvinger, François, Evans, Robert, Sriranganathan, Nammalwar, Leroith, Tanya, Pierson, F., 2015

Herd management and social variables associated with bulk tank somatic cell count in dairy herds in the eastern United States
Journal of dairy science, Schewe, R. L., Kayitsinga, J., Contreras, G. A., Odom, C., Coats, W. A., Durst, P., Hovingh, Ernest Peter, Martinez, R. O., Mobley, R., Moore, S., Erskine, R. J., 2015

Genomic characterization of a novel avian arthritis orthoreovirus variant by next-generation sequencing
Archives of Virology, Tang, Yi, Lu, Huaguang, 2015

Differential nucleobase protection against 5-fluorouracil toxicity for squamous and columnar cells: Implication for tissue function and oncogenesis
Investigational New Drugs, Vanden Heuvel, John Patrick, Thompson, Jerry T., Albrecht, Prajakta, Mandetta, Donald, Kamerow, Harry, Ford, John P., 2015

Type six secretion system of bordetella bronchiseptica and adaptive immune components limit intracellular survival during infection
PloS one, Bendor, Liron, Weyrich, Laura S., Linz, Bodo, Rolin, Olivier Y., Taylor, Dawn L., Goodfield, Laura L., Smallridge, William E., Kennett, Mary J., Harvill, Eric Thomas, 2015

Isolation and molecular characterization of newly emerging avian reovirus variants and novel strains in Pennsylvania, USA, 2011-2014
Scientific reports, Lu, Huaguang, Tang, Yi, Dunn, Patricia A., Wallner-Pendleton, Eva A., Lin, Lin, Knoll, Eric A., 2015

Infezione sperimentale di vacche e vitelli Holstein con virus della malattia emorragica epizootica (EHDV-7)
Veterinaria Italiana, Ruder, Mark G., Mead, Daniel G., Stallknecht, David E., Kedmi, Maor, Klement, Eyal, Brown, Justin D., Carter, Deborah L., Howerth, Elizabeth W., 2015

The dynamics of avian influenza in Lesser Snow Geese
Ecological Applications, Samuel, Michael D., Hall, Jeffrey S., Brown, Justin D., Goldberg, Diana R., Ip, Hon, Baranyuk, Vasily V., 2015

Chemopreventive effects of dietary eicosapentaenoic acid supplementation in experimental myeloid leukemia
Cancer Prevention Research, Finch, Emily R., Kudva, Avinash K., Quickel, Michael D., Goodfield, Laura L., Kennett, Mary J., Whelan, Jay, Paulson, Robert F., Sandeep Prabhu, K., 2015

Povidone iodine rectal preparation at time of prostate needle biopsy is a simple and reproducible means to reduce risk of procedural infection
Journal of Visualized Experiments, Raman, Jay D., Lehman, Kathleen K., Dewan, Kalyan, Kirimanjeswara, Girish, 2015

Peroxisome proliferator-activated receptor-D (PPARD) coordinates mouse spermatogenesis by modulating extracellular signal-regulated kinase (ERK)-dependent signaling
Journal of Biological Chemistry, Yao, Pei Li, Chen, Li Ping, Hess, Rex A., Müller, Rolf, Gonzalez, Frank J., Peters, Jeffrey M., 2015

Molecular Epidemiology of Nontyphoidal Salmonella in Poultry and Poultry Products in India
Indian Journal of Microbiology, Saravanan, Sellappan, Purushothaman, Venketaraman, Murthy, Thippichettypalayam Ramasamy Gopala Krishna, Sukumar, Kuppannan, Srinivasan, Palani, Gowthaman, Vasudevan, Balusamy, Mohan, Atterbury, Robert, Kuchipudi, Suresh Varma, 2015

Lack of soluble fiber drives diet-induced adiposity in mice
American Journal of Physiology - Gastrointestinal and Liver Physiology, Chassaing, Benoit, Miles-Brown, Jennifer, Pellizzon, Michael, Ulman, Edward, Ricci, Matthew, Zhang, Limin, Patterson, Andrew D., Vijay-Kumar, Matam, Gewirtz, Andrew T., 2015

Reduction of Tetrathionate by Mammalian Thioredoxin Reductase
Biochemistry, Narayan, Vivek, Kudva, Avinash K., Prabhu, Kumble Sandeep, 2015

Adaptation of the human aryl hydrocarbon receptor to sense microbiota-derived indoles
Scientific reports, Hubbard, Troy D., Murray, Iain A., Bisson, William H., Lahoti, Tejas S., Gowda, Krishne, Amin, Shantu G., Patterson, Andrew D., Perdew, Gary H., 2015

An impedance aptasensor with microfluidic chips for specific detection of H5N1 avian influenza virus
Sensors (Switzerland), Lum, Jacob, Wang, Ronghui, Hargis, Billy, Tung, Steve, Bottje, Walter, Lu, Huaguang, Li, Yanbin, 2015

Selenium and inflammatory bowel disease.
American journal of physiology. Gastrointestinal and liver physiology, Kudva, A, Shay, A, Prabhu, Kumble, 2015

Metabolomics Reveals that Aryl Hydrocarbon Receptor Activation by Environmental Chemicals Induces Systemic Metabolic Dysfunction in Mice
Environmental Science and Technology, Zhang, Limin, Hatzakis, Emmanuel, Nichols, Robert G., Hao, Ruixin, Correll, Jared, Smith, Philip B., Chiaro, Christopher R., Perdew, Gary H., Patterson, Andrew D., 2015

Persistent organic pollutants modify gut microbiota–host metabolic homeostasis in mice through aryl hydrocarbon receptor activation
Environmental health perspectives, Zhang, Limin, Nichols, Robert G., Correll, Jared, Murray, Iain A., Tanaka, Naoki, Smith, Philip B., Hubbard, Troy D., Sebastian, Aswathy, Albert, Istvan, Hatzakis, Emmanuel, Gonzalez, Frank J., Perdew, Gary H., Patterson, Andrew D., 2015

An observational study of the temporal and spatial patterns of Marek's-disease-associated leukosis condemnation of young chickens in the United States of America
Preventive Veterinary Medicine, Kennedy, David A., Dunn, John R., Dunn, Patricia A., Read, Andrew F., 2015

Role of fibroblast growth factor 21 in the early stage of NASH induced by methionine- and choline-deficient diet
Biochimica et Biophysica Acta - Molecular Basis of Disease, Tanaka, Naoki, Takahashi, Shogo, Zhang, Yuan, Krausz, Kristopher W., Smith, Philip B., Patterson, Andrew D., Gonzalez, Frank J., 2015

Biology-Driven Gene-Gene Interaction Analysis of Age-Related Cataract in the eMERGE Network
Genetic Epidemiology, Hall, Molly, Verma, Shefali S., Wallace, John, Lucas, Anastasia, Berg, Richard L., Connolly, John, Crawford, Dana C., Crosslin, David R., de Andrade, Mariza, Doheny, Kimberly F., Haines, Jonathan L., Harley, John B., Jarvik, Gail P., Kitchner, Terrie, Kuivaniemi, Helena, Larson, Eric B., Carrell, David S., Tromp, Gerard, Vrabec, Tamara R., Pendergrass, Sarah A., Mccarty, Catherine A., Ritchie, Marylyn Deriggi, 2015

Effect of intrauterine dextrose on reproductive performance of lactating dairy cows diagnosed with purulent vaginal discharge under certified organic management
Journal of dairy science, Maquivar, M. G., Barragan, Adrian, Velez, J. S., Bothe, H., Schuenemann, G. M., 2015

DNA microarray global gene expression analysis of influenza virus-infected chicken and duck cells
Genomics Data, Kuchipudi, Suresh Varma, Dunham, Stephen P., Chang, Kin Chow, 2015

Differential regulation of Th17 and T regulatory cell differentiation by aryl hydrocarbon receptor dependent xenobiotic response element dependent and independent pathways
Toxicological Sciences, Mohinta, Sonia, Kannan, Arun K., Gowda, Krishne, Amin, Shantu, Perdew, Gary H., August, Avery, 2015

Genomic characterization of a turkey reovirus field strain by Next-Generation Sequencing
Infection, Genetics and Evolution, Tang, Yi, Lu, Huaguang, Sebastian, Aswathy, Yeh, Yin-Ting, Praul, Craig A., Albert, Istvan, Zheng, Siyang, 2015

Inhibition of farnesoid X receptor signaling shows beneficial effects in human obesity
Journal of Hepatology, Gonzalez, Frank J., Jiang, Changtao, Bisson, William H., Patterson, Andrew David, 2015

Genetic and pharmacological analysis identifies a physiological role for the AHR in epidermal differentiation
Journal of Investigative Dermatology, Van Den Bogaard, Ellen H., Podolsky, Michael A., Smits, Jos P., Cui, Xiao, John, Christian, Gowda, Krishne, Desai, Dhimant, Amin, Shantu G., Schalkwijk, Joost, Perdew, Gary H., Glick, Adam B., 2015

Dysbiosis caused by vitamin D receptor deficiency confers colonization resistance to Citrobacter rodentium through modulation of innate lymphoid cells
Mucosal Immunology, Chen, J., Waddell, A., Lin, Y. D., Cantorna, Margherita Teresa-Anna, 2015

NKT cells can help mediate the protective effects of 1,25-dihydroxyvitamin D3 in experimental autoimmune encephalomyelitis in mice
International Immunology, Waddell, Amanda, Zhao, Jun, Cantorna, Margherita Teresa-Anna, 2015

Development of animal models against emerging coronaviruses: From SARS to MERS coronavirus.
Virology, Sutton, Troy, Subbarao, K, 2015

Alaskan seaweeds lower inflammation in RAW 264.7 macrophages and decrease lipid accumulation in 3T3-L1 adipocytes
Journal of Functional Foods, Kellogg, Joshua, Esposito, Debora, Grace, Mary H., Komarnytsky, Slavko, Lila, Mary Ann, 2015

Vitamin D and 1,25(OH)2D regulation of T cells.
Nutrients, Cantorna, Margherita, Snyder, Lori, Lin, Y, Yang, L, 2015

Molecular surveillance for lymphoproliferative disease virus in wild Turkeys (Meleagris gallopavo) from the eastern United States
PloS one, Thomas, Jesse M., Allison, Andrew B., Holmes, Edward C., Phillips, Jamie E., Bunting, Elizabeth M., Yabsley, Michael J., Brown, Justin D., 2015

Modulation of colon cancer by nutmeg
Journal of Proteome Research, Li, Fei, Yang, Xiu Wei, Krausz, Kristopher W., Nichols, Robert G., Xu, Wei, Patterson, Andrew David, Gonzalez, Frank J., 2015

Genomic characterization of a broiler reovirus field strain detected in Pennsylvania
Infection, Genetics and Evolution, Tang, Yi, Lu, Huaguang, 2015

The σC Gene Characterization of Seven Turkey Arthritis Reovirus Field Isolates in Pennsylvania during 2011-2014
Journal of Veterinary Science & Medicine, Wallner-Pendleton, Eva, 2015

Molecular detection of the index case of a subclinical Salmonella Kentucky epidemic on a dairy farm
Epidemiology and Infection, Haley, B. J., Allard, M., Brown, E., Hovingh, E., Karns, J. S., Van Kessel, J. S., 2015

Quantitative analysis of purine nucleotides indicates that purinosomes increase de Novo purine biosynthesis
Journal of Biological Chemistry, Zhao, Hong, Chiaro, Christopher R., Zhang, Limin, Smith, Philip B., Chan, Chung Yu, Pedley, Anthony M., Pugh, Raymond J., French, Jarrod B., Patterson, Andrew D., Benkovic, Stephen J., 2015

M-CSF from cancer cells induces fatty acid synthase and PPARβ/δ activation in tumor myeloid cells, leading to tumor progression
Cell Reports, Park, Jonghanne, Lee, Sang Eun, Hur, Jin, Hong, Eun Byeol, Choi, Jae Il, Yang, Ji Min, Kim, Ju Young, Kim, Young Chan, Cho, Hyun Jai, Peters, Jeffrey Maurice, Ryoo, Seung Bum, Kim, Young Tae, Kim, Hyo Soo, 2015

Comparative analysis of super-shedder strains of Escherichia coli O157:H7 reveals distinctive genomic features and a strongly aggregative adherent phenotype on bovine rectoanal junction squamous epithelial cells
PloS one, Cote, Rebecca, Katani, Robab, Moreau, Matthew R., Kudva, Indira T., Arthur, Terrance M., DebRoy, Chitrita, Mwangi, Michael M., Albert, Istvan, Garay, Juan Antonio Raygoza, Li, Lingling, Brandl, Maria T., Carter, Michelle Q., Kapur, Vivek, 2015

Epigenetic regulation of inflammatory gene expression in macrophages by selenium
Journal of Nutritional Biochemistry, Narayan, Vivek, Ravindra, Kodihalli C., Liao, Chang, Kaushal, Naveen, Carlson, Bradley A., Prabhu, Kumble Sandeep, 2015

H7N9 influenza A virus in turkeys in Minnesota
Journal of General Virology, Lebarbenchon, Camille, Pedersen, Janice C., Sreevatsan, Srinand, Ramey, Andrew M., Dugan, Vivien G., Halpin, Rebecca A., Ferro, Pamela J., Lupiani, Blanca, Enomoto, Shinichiro, Poulson, Rebecca L., Smeltzer, Martin, Cardona, Carol J., Mark Tompkins, S., Wentworth, David E., Stallknecht, David E., Brown, Justin D., 2015

Intestinal farnesoid X receptor signaling promotes nonalcoholic fatty liver disease
Journal of Clinical Investigation, Jiang, Changtao, Xie, Cen, Li, Fei, Zhang, Limin, Nichols, Robert G., Krausz, Kristopher W., Cai, Jingwei, Qi, Yunpeng, Fang, Zhong Ze, Takahashi, Shogo, Tanaka, Naoki, Desai, Dhimant, Amin, Shantu G., Albert, Istvan, Patterson, Andrew D., Gonzalez, Frank J., 2015

Characterization of a multidrug resistant C. difficile meat isolate
International journal of food microbiology, Mooyottu, Shankumar, Flock, Genevieve, Kollanoor-Johny, Anup, Upadhyaya, Indu, Jayarao, Bhushan, Venkitanarayanan, Kumar, 2015

Session Introduction: Characterizing the the importance of environmental exposures, interactions between the environment and genetic architecture, and genetic interactions
Pacific Symposium on Biocomputing, Hall, Molly, Verma, S, Wall, D, Moore, J, Keating, B, Campbell, D, Gibson, G, Asselbergs, F, Pendergrass, S, 2015

Microbiota-Dependent Hepatic Lipogenesis Mediated by Stearoyl CoA Desaturase 1 (SCD1) Promotes Metabolic Syndrome in TLR5-Deficient Mice
Cell Metabolism, Singh, Vishal, Chassaing, Benoit, Zhang, Limin, San Yeoh, Beng, Xiao, Xia, Kumar, Manish, Baker, Mark T., Cai, Jingwei, Walker, Rachel, Borkowski, Kamil, Harvatine, Kevin J., Singh, Nagendra, Shearer, Gregory C., Ntambi, James M., Joe, Bina, Patterson, Andrew D., Gewirtz, Andrew T., Vijay-Kumar, Matam, 2015

Novel reassortant human-like H3N2 and H3N1 influenza A viruses detected in pigs are virulent and antigenically distinct from swine viruses endemic to the United States
Journal of virology, Rajão, Daniela S., Gauger, Phillip C., Anderson, Tavis K., Lewis, Nicola S., Abente, Eugenio J., Killian, Mary Lea, Perez, Daniel R., Sutton, Troy C., Zhang, Jianqiang, Vincent, Amy L., 2015

Cyclic avian mass mortality in the northeastern United States is associated with a novel orthomyxovirus
Journal of virology, Allison, Andrew B., Ballard, Jennifer R., Tesh, Robert B., Brown, Justin D., Ruder, Mark G., Keel, M. Kevin, Munk, Brandon A., Mickley, Randall M., Gibbs, Samantha E.J., Travassos da Rosa, Amelia P.A., Ellis, Julie C., Ip, Hon S., Shearn-Bochsler, Valerie I., Rogers, Matthew B., Ghedin, Elodie, Holmes, Edward C., Parrish, Colin R., Dwyer, Chris, 2015

Chicken and duck myotubes are highly susceptible and permissive to influenza virus infection
Journal of virology, Baquero-Perez, Belinda, Kuchipudi, Suresh V., Ho, Jemima, Sebastian, Sujith, Puranik, Anita, Howard, Wendy, Brookes, Sharon M., Brown, Ian H., Chang, Kin Chow, 2015

Prevalence and distribution of soil-borne zoonotic pathogens in Lahore district of Pakistan
Frontiers in Microbiology, Shabbir, Muhammad Z., Jamil, Tariq, Ali, Asad A., Ahmad, Arfan, Naeem, Muhammad, Chaudhary, Muhammad H., Bilal, Muhammad, Ali, Muhammad A., Muhammad, Khushi, Yaqub, Tahir, Bano, Asghari, Mirza, Ali I., Shabbir, Muhammad A.B., McVey, Walter R., Patel, Ketan, Francesconi, Stephen, Jayarao, Bhushan M., Rabbani, Masood, 2015

Skeletal Muscle in Influenza Virus Infection-a Key Player or a Bystander?
British Journal of Virology, Kuchipudi, Suresh, Kin-Chow, Chang, 2015

In vitro culture of stress erythroid progenitors identifies distinct progenitor populations and analogous human progenitors
Blood, Xiang, Jie, Wu, Dai Chen, Chen, Yuanting, Paulson, Robert F., 2015

Vitamin A-deficient hosts become nonsymptomatic reservoirs of Escherichia coli-like enteric infections
Infection and Immunity, McDaniel, Kaitlin L., Restori, Katherine H., Dodds, Jeffery, Kennett, Mary J., Ross, A. Catharine, Cantornaa, Margherita T., 2015

Next-generation analysis of cataracts
Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, Pendergrass, Sarah A., Verma, Shefali S., Hall, Molly A., Holzinger, Emily R., Moore, Carrie B., Wallace, John R., Dudek, Scott M., Huggins, Wayne, Kitchner, Terrie, Waudby, Carol, Berg, Richard, Mccarty, Catherine A., Ritchie, Marylyn D., 2015

Genome sequences of two strains of Salmonella enterica serovar Enteritidis isolated from shell eggs
Genome Announcements, Moreau, Matthew R., Wijetunge, Dona Saumya S., Hewage, Eranda Mangala K.Kurundu, Jayarao, Bhushan M., Kariyawasam, Subhashinie, 2015

Phenome-Wide Association Studies
Human Heredity, Pendergrass, Sarah A., Verma, Anurag, Okula, Anna, Hall, Molly, Crawford, Dana C., Ritchie, Marylyn Deriggi, 2015