Publications

Almond snacking modulates gut microbiome and metabolome in association with improved cardiometabolic and inflammatory markers
npj Science of Food, Park, Gwoncheol, Johnson, Katelyn, Miller, Katelyn, Kadyan, Saurabh, Singar, Saiful, Patoine, Cole, Hao, Fuhua, Lee, Yujin, Patterson, Andrew D., Arjmandi, Bahram, Kris-Etherton, Penny Margaret, Berryman, Claire E., Nagpal, Ravinder, 2025

Exposure and survival of wild raptors during the 2022–2023 highly pathogenic influenza a virus outbreak
Scientific Reports, Rayment, Kelsey M., Franzen-Klein, Dana, Kurimo-Beechuk, Elizabeth, Poulson, Rebecca L., Brown, Justin, Mendoza, Kristelle, Etterson, Matthew, Nicoletti, Frank, Cardona, Carol, Stallknecht, David E., Hall, Victoria, 2025

Infestation by Sarcoptes scabiei causes distinct differences in sarcoptic mange disease syndromes among sympatric carnivoran species
International Journal for Parasitology: Parasites and Wildlife, Tiffin, Hannah S., Brown, Justin D., Kelly, Kathleen, Van Why, Kyle R., Ternent, Mark, Camire, Andrew C., Schuler, Edward J.A., Marconi, Richard T., Machtinger, Erika T., 2025

Biomarkers of environmental enteric dysfunction and neurodevelopmental outcomes among children in rural Bangladesh and Kenya: a prospective cohort study
American Journal of Clinical Nutrition, Ho, Gene, Achando, Beryl, Ali, Shahjahan, Hemlock, Caitlin, Pitchik, Helen, Stewart, Christine, Tofail, Fahmida, Rahman, Md. Ziaur, Allaudin, Mohammad, Rao, Gouthami, Dentz, Holly, Buleti, John, Nekesa, Cecilia, Arnold, Charles, Famida, Syeda, Hossen, Md. Saheen, Mutsuddi, Palash, Akter, Salma, Grembi, Jessica, Tan, Soophia, Allaudin, Sarah, Meerkerk, Theodora, Wolfe, Marlene, Cheruiyot, Priscah, Njenga, Sammy, Shoab, Abul, Rahman, Mahbubur, Unicomb, Leanne, Arnold, Benjamin, Kariger, Patricia, Hubbard, Alan, Colford, Jr., John, Pickering, Amy, Null, Clair, Luby, Stephen, Fernald, Lia, Mertens, Andrew, Lin, Audrie, 2025

Differential hepatic activation of mouse and human peroxisome proliferator-activated receptor-α by perfluorohexane sulfonate
Toxicological Sciences, Khan, Yahya, Schmidt, Annalee M., Oldro, Kyle J., Zhu, Xiaoyang, Kramer, Angelina R., Hamilton, Sarah R., Bleil, Katherine O., Krisko, Ryan M., Zitzow, Jeremiah D., Tian, Yuan, Chang, Shu Ching, Walter, Vonn, Cohen, Samuel M., Gonzalez, Frank J., Patterson, Andrew D., Peters, Jeffrey M., 2025

Listeriosis and the Dangers That May Lurk Among the Flock
Penn State Extension, Kutsaya, Sophia, Frye, Emily, Niel, Kayla, Lighty, M, 2025

Pathways through which water, sanitation, hygiene, and nutrition interventions reduce antibiotic use in young children: a mediation analysis of a cohort nested within a cluster-randomized trial
EClinicalMedicine, Nguyen, A, Heitmann, G, Mertens, A, Ashraf, S, Rahman, M, Ali, S, Rahman, M, Arnold, B, Grembi, Jessica, Lin, A, Ercumen, A, Benjamin-Chung, J, 2025

PREVALENCE OF DIROFILARIA MICROFILARIA IN AMERICAN BLACK BEARS (URSUS AMERICANUS) IN PENNSYLVANIA, 2018-2020
Journal of Parasitology, Mazzatosta, Alia, Cleveland, Christopher A., Yabsley, Michael J., Haynes, Ellen, Tiffin, Hannah S., Machtinger, Erika T., Johnson, Joshua B., Ternent, Mark, Carrollo, Emily, Brown, Justin D., 2025

Defining the transmissible dose 50%, the donor inoculation dose that results in airborne transmission to 50% of contacts, for two pandemic influenza viruses in ferrets
bioRxiv, Field, C., Septer, K.M., Patel, D.R., Weaver, V.C, Sim, D.G., Restori, R., Sutton, Troy, 2025

NLRP3 and AIM2 inflammasomes exacerbate the pathogenic Th17 cell response to eggs of the helminth Schistosoma mansoni
PLoS Pathogens, Suresh Kumar Meena Kumari, Madhusoodhanan, Liu, Pengyu, Nitchman, Megan S., Chaudhary, Santoshi, Jump, Kaile, Morales, Yoelkys, Miller, Emily A., Shecter, Ilana, Stadecker, Miguel J., Kalantari, Parisa, 2025

Phytochemical-Mediated Ah Receptor Activity Is Dependent on Dietary Context
Nutrients, Dong, Fangcong, Annalora, Andrew J., Murray, Iain A., Chakraborty, Debopriya, Coslo, Denise M., Marcus, Craig, Patterson, Andrew D., Perdew, Gary H., 2025

2023–2024 Toxicological Sciences Paper of the Year
Toxicological Sciences, Cory-Slechta, Deborah, Peters, Jeffrey M., 2025

Discovery of metabolites prevails amid in-source fragmentation
Nature Metabolism, El Abiead, Yasin, Rutz, Adriano, Zuffa, Simone, Amer, Bashar, Xing, Shipei, Brungs, Corinna, Schmid, Robin, Correia, Mario S.P., Caraballo-Rodriguez, Andres Mauricio, Zarrinpar, Amir, Mannochio-Russo, Helena, Witting, Michael, Mohanty, Ipsita, Pluskal, Tomáš, Bittremieux, Wout, Knight, Rob, Patterson, Andrew D., van der Hooft, Justin J.J., Böcker, Sebastian, Dunn, Warwick B., Linington, Roger G., Wishart, David S., Wolfender, Jean Luc, Fiehn, Oliver, Zamboni, Nicola, Dorrestein, Pieter C., 2025

Pandemic risk stemming from the bovine H5N1 outbreak: an account of the knowns and unknowns.
Journal of virology, Lowen, A, Baker, A, Bowman, A, García-Sastre, A, Hensley, S, Lakdawala, S, Moncla, L, Nelson, M, Pekosz, A, Poulson, R, Puryear, W, Runstadler, J, Sutton, Troy, Tompkins, S, Webby, R, 2025

The Janus-facedness of the aryl hydrocarbon receptor pathway Report of the 6th International AHR Meeting: Research, Prevention, Therapy
Biochemical Pharmacology, Haarmann-Stemmann, T, Reichert, D, Coumoul, X, Lawrence, B, Perdew, Gary, Sherr, D, Weighardt, H, Rolfes, K, Esser, C, 2025

Curiosity Won't Kill Your Cat, but Avian Influenza Might
Penn State Extension, Frye, Emily, Niel, Kayla, Lighty, M, 2025

Treatment heterogeneity of water, sanitation, hygiene, and nutrition interventions on child growth by environmental enteric dysfunction and pathogen status for young children in Bangladesh
PLoS Neglected Tropical Diseases, Butzin-Dozier, Z, Ji, Yunwen, Coyle, J, Malenica, I, Rogawski McQuade, E, Grembi, Jessica, Platts-Mills, J, Houpt, E, Graham, J, Ali, Shahjahan, Rahman, Md. Ziaur, Alauddin, M, Famida, S, Akther, S, Hossen, M, Mutsuddi, P, Shoab, A, Rahman, Mahbubur, Islam, Md. Ohedul, Miah, R, Taniuchi, M, Liu, Jie, Alauddin, S, Stewart, C, Luby, S, Colford, Jr, J, Hubbard, A, Mertens, A, Lin, Audrie, 2025

The Impact of Sodium Selenite and Seleno-L-Methionine on Stress Erythropoiesis in a Murine Model of Hemolytic Anemia
Journal of Nutrition, Gong, Hangdi, Bai, Yuting, Rahoi, Dane, Paulson, Robert F., Prabhu, K. Sandeep, 2025

Selenoproteome depletion enhances oxidative stress and alters neutrophil functions in Citrobacter rodentium infection leading to gastrointestinal inflammation
Free Radical Biology and Medicine, Lee, Tai Jung, Liao, Hsiao Chi, Salim, Agus, Nettleford, Shaneice K., Kleinman, Kendall L., Carlson, Bradley A., Prabhu, K. Sandeep, 2025

Immunobiology of bile and cholangiocytes
Journal of Autoimmunity, Li, Y, Leung, P, Zhang, W, Zhang, S, Liu, Z, Kurth, M, Patterson, Andrew, Gershwin, M, Song, J, 2025

Molecular Epidemiology of Salmonella enterica Serotype Dublin Isolated from 2011 to 2022 from Veal and Dairy Cattle in Pennsylvania
Microorganisms, Sekhwal, Manoj, Li, L, Pierre, Traci, Matthews, Tammy, Luley, E, Tewari, Deepanker, Kuchipudi, S, Jayarao, B, Byukusenge, Maurice, 2025

Respiratory Disease, Diagnostics, and Treatment
North American Veterinary Community, Niel, Kayla, Lighty, M, 2025

Elevated mortality in a pasture-raised, organic layer flock
Journal of the American Veterinary Medical Association, Frye, Emily, Niel, Kayla, Lighty, M, 2025

Water, sanitation, handwashing, and nutritional interventions can reduce child antibiotic use: evidence from Bangladesh and Kenya
Nature Communications, Ercumen, A, Mertens, A, Butzin-Dozier, Z, Jung, D, Ali, Shahjahan, Achando, B, Rao, G, Hemlock, C, Pickering, A, Stewart, C, Tan, Sophia, Grembi, Jessica, Benjamin-Chung, J, Wolfe, M, Ho, G, Rahman, Md. Ziaur, Arnold, C, Dentz, H, Njenga, S, Meerkerk, T, Chen, B, Nadimpalli, M, Islam, Md. Ohedul, Hubbard, A, Null, C, Unicomb, L, Rahman, Mahbubur, Colford, Jr, J, Luby, S, Arnold, Benjamin, Lin, Audrie, 2025

Associations between weather extremes and faecal contamination along pathogen transmission pathways in rural Bangladeshi households: a prospective observational study
The Lancet Planetary Health, Niven, C, Islam, Mahfuza, Nguyen, A, Grembi, Jessica, Mertens, A, Pickering, A, Kwong, L, Alam, M, Sen, D, Islam, S, Rahman, Mahbubur, Unicomb, L, Hubbard, A, Luby, S, Colford, Jr, J, Arnold, Benjamin, Benjamin-Chung, J, Ercumen, A, 2025

In vitro microbiota model recapitulates and predicts individualised sensitivity to dietary emulsifier
Gut, Rytter, H, Naimi, S, Wu, G, Lewis, J, Duquesnoy, M, Vigué, L, Tenaillon, O, Belda, E, Vazquez-Gomez, M, Touly, N, Arnone, D, Hao, F, Ley, R, Clément, K, Peyrin-Biroulet, L, Patterson, Andrew, Gewirtz, A, Chassaing, B, 2025

Microbiota and metabolite-based prediction tool for colonic polyposis with and without a known genetic driver
Gut Microbes, Katona, Bryson W., Shukla, Ashutosh, Hu, Weiming, Nyul, Thomas, Dudzik, Christina, Arvanitis, Alex, Clay, Daniel, Dungan, Michaela, Weber, Marina, Tu, Vincent, Hao, Fuhua, Gan, Shuheng, Chau, Lillian, Buchner, Anna M., Falk, Gary W., Jaffe, David L., Ginsberg, Gregory, Palmer, Suzette N., Zhan, Xiaowei, Patterson, Andrew D., Bittinger, Kyle, Ni, Josephine, 2025

Upland Game Birds, Ruder, Mark, Brown, Justin, 2025

Hypertrophic osteopathy in 4 white-tailed deer, with a literature review
Journal of Veterinary Diagnostic Investigation, Weyna, Alisia A.W., Luley, Erin, Brown, Justin D., Niedringhaus, Kevin D., Gibbs, Samantha E.J., Nemeth, Nicole M., 2025

Corrigendum: Use of intrauterine dextrose as an alternative to systemic antibiotics for treatment of clinical metritis in dairy cattle: a microbiome perspective (Frontiers in Veterinary Science, (2024), 11, (1478288), 10.3389/fvets.2024.1478288)
Frontiers in Veterinary Science, Lection, Jennine, Van Syoc, Emily, Miles, Asha, Hamilton, Julia, Martinez, Marcela, Bas, Santiago, Silverman, Justin, Barragan, Adrian, Ganda, Erika, 2025

Nutrient limitation determines biological interactions between a mixotrophic Chrysophyte and toxin-producing Microcystis
Journal of Plankton Research, Princiotta, Sarah, Hiripitiyage, Devinda, Hiripitiyage, Yasawantha, Holen, D, Kellogg, Joshua, Sturm, Belinda, Strum, Belinda, Harris, Tedd, 2025

Application of predictive modeling tools for the identification of Ocimum spp. herbal products
Fresenius Zeitschrift fur Analytische Chemie, Abraham, Evelyn, Chamberlain, Sarah, Perera, Willam, Jordan, R, Kellogg, Joshua, 2025

Ghost Pipe Then and Now: the Influence of Digital Media on the Medicinal Use of Monotropa uniflora in the United States
Economic Botany, Anez, Savannah G., Burkhart, Eric P., Kellogg, Joshua J., 2025

Thank You, ToxSci 2024 Reviewers
Toxicological Sciences, Peters, Jeffrey M., 2024

Therapeutic targeting of differentiation-state dependent metabolic vulnerabilities in diffuse midline glioma
Nature Communications, Mbah, Nneka E., Myers, Amy L., Sajjakulnukit, Peter, Chung, Chan, Thompson, Joyce K., Hong, Hanna S., Giza, Heather, Dang, Derek, Nwosu, Zeribe C., Shan, Mengrou, Sweha, Stefan R., Maydan, Daniella D., Chen, Brandon, Zhang, Li, Magnuson, Brian, Zhu, Zirui, Radyk, Megan, Lavoie, Brooke, Yadav, Viveka Nand, Koo, Imhoi, Patterson, Andrew D., Wahl, Daniel R., Franchi, Luigi, Agnihotri, Sameer, Koschmann, Carl J., Venneti, Sriram, Lyssiotis, Costas A., 2024

Individualized microbiotas dictate the impact of dietary fiber on colitis sensitivity
Microbiome, Bonazzi, Erica, Bretin, Alexis, Vigué, Lucile, Hao, Fuhua, Patterson, Andrew D., Gewirtz, Andrew T., Chassaing, Benoit, 2024

Prepartum anti-inflammatory therapies in Holstein dairy cows blocked by parity and body condition score group: Effects on metabolic stress, systemic inflammation, performance, and health
Journal of Dairy Science, Jimenez, E., Spring, J., Zarei, P., Martinez, M., Sorto, R., Hovingh, E., Lawhead, J., Lection, J., Barragan, A. A., 2024

Heat stable and intrinsically sterile liquid protein formulations
Nature Communications, Lawanprasert, Atip, Singh, Harminder, Pimcharoen, Sopida, Vargas, Mariangely González, Dewan, Arshiya, Kirimanjeswara, Girish S., Medina, Scott H., 2024

Survey for Babesia spp. in wildlife in the eastern United States
International Journal for Parasitology: Parasites and Wildlife, Baker, Eliza, Dennis, Michelle, Jensen, Alex, Garrett, Kayla Buck, Cleveland, Christopher A., Yabsley, Michael J., Brown, Justin D., Why, Kyle Van, Gerhold, Richard, 2024

Surveillance of Highly Pathogenic Avian Influenza Virus in Wild Canids from Pennsylvania, USA
Animals, Niedringhaus, Kevin D., Chan, Taylor C., McDowell, Ashley, Maxwell, Lauren, Stevens, Madison, Potts, Lane, Miller, Erica, Anis, Eman, Why, Kyle Van, Keller, Thomas, Stallknecht, David, Poulson, Rebecca L., Bahrs, Kaitlyn, Brown, Justin D., 2024

TRICHINELLA INFECTIONS IN WILDLIFE FROM PENNSYLVANIA: VARIATION IN EXPOSURE AMONG COYOTE (CANIS LATRANS), GRAY FOX (UROCYON CINEREOARGENTEUS), AND RED FOX (VULPES VULPES)
Journal of Parasitology, Dubey, J. P., de Araujo, L. S., Gupta, A., Thompson, P., Ankrah, A., Battle, J., Van Why, K., Brown, J. D., 2024

A diet-dependent host metabolite shapes the gut microbiota to protect from autoimmunity
Cell Reports, Alexander, Margaret, Upadhyay, Vaibhav, Rock, Rachel, Ramirez, Lorenzo, Trepka, Kai, Puchalska, Patrycja, Orellana, Diego, Ang, Qi Yan, Whitty, Caroline, Turnbaugh, Jessie A., Tian, Yuan, Dumlao, Darren, Nayak, Renuka, Patterson, Andrew, Newman, John C., Crawford, Peter A., Turnbaugh, Peter J., 2024

Developmental Vitamin D Deficiency and the Vitamin D Receptor Control Hematopoiesis
Journal of Immunology, Arora, Juhi, Froelich, Nicole E., Tang, Mengzhu, Weaver, Veronika, Paulson, Robert F., Cantorna, Margherita T., 2024

Intake and digestibility of four rations with different fiber levels in alpacas (Vicugna pacos)
Tropical Animal Health and Production, Obregón-Cruz, Ana B., Gómez, Carlos A., Osorio, Cesar M., Van Saun, Robert J., 2024

Trypanosoma cruzi infection in American black bears (Ursus americanus): A case report in a cub from California and serologic survey for exposure in wild black bears from several states
Veterinary Parasitology: Regional Studies and Reports, Hughes, Reece, Francisco, Raquel, Garrett, Kayla, Willitts, Kevin, Munk, Brandon, Brown, Justin, Rodriguez, Carlos, von Dohlen, Alexa Rosypal, McCarrall, Sterling, Dennard, T'Keyah K., Champion, Timothy, Brown-Fox, Tracy, Strules, Jennifer, Olfenbuttel, Colleen, DePerno, Christopher, Hamer, Sarah A., Yabsley, Michael J., 2024

Gray fox (Urocyon cinereoargenteus) identified as a new intermediate host for Sarcocystis neurona
Veterinary Parasitology: Regional Studies and Reports, Dubey, Jitender P., Gupta, Aditya, Calero-Bernal, Rafael, de Araujo, Larissa S., García-Gil, María L., Battle, Jaquin, Ankarah, Ankrah, Van Why, Kyle, Brown, Justin D., Rosenthal, Benjamin M., 2024

An O-methylflavone from Artemisia afra kills non-replicating hypoxic Mycobacterium tuberculosis
Journal of Ethnopharmacology, Kellogg, Joshua J., Alonso, Maria Natalia, Jordan, R. Teal, Xiao, Junpei, Cafiero, Juan Hilario, Bush, Trevor, Chen, Xiaoling, Towler, Melissa, Weathers, Pamela, Shell, Scarlet S., 2024

Sphingosine Kinase 2 Regulates Aryl Hydrocarbon Receptor Nuclear Translocation and Target Gene Activation
Advanced Science, Yokoyama, Shigetoshi, Koo, Imhoi, Aibara, Daisuke, Tian, Yuan, Murray, Iain Alexander, Collins, Stephanie L., Coslo, Denise M., Kono, Mari, Peters, Jeffrey Maurice, Proia, Richard L., Gonzalez, Frank J., Perdew, Gary H., Patterson, Andrew D., 2024

Chlorpyrifos modulates the mouse gut microbiota and metabolic activity
Environmental International, Nichols, Robert G., Rimal, Bipin, Hao, Fuhua, Peters, Jeffrey Maurice, Davenport, Emily R., Patterson, Andrew D., 2024

Hepatic stearoyl-CoA desaturase-1 deficiency induces fibrosis and hepatocellular carcinoma-related gene activation under a high carbohydrate low fat diet
BBA - Specialised Section On Lipids and Related Subjects, Ntambi, Jayne Norah, Kalyesubula, Mugagga, Cootway, Dylan, Lewis, Sarah A., Phang, Yar Xin, Liu, Zhaojin, O'Neill, Lucas M., Lefers, Lucas, Huff, Hailey, Miller, Jacqueline Rose, Pegkou Christofi, Veronica, Anderson, Ethan, Aljohani, Ahmed, Mutebi, Francis, Dutta, Mainak, Patterson, Andrew, Ntambi, James M., 2024

Comparison of Butorphanol-Azaperone-Medetomidine and Nalbuphine-Medetomidine-Azaperone in Free-Ranging Elk (Cervus canadensis) in Pennsylvania, USA
Journal of Wildlife Diseases, Corondi, Avery M., Brown, Justin D., Banfield, Jeremiah E., Walter, William David, 2024

Vaccine-induced NA immunity decreases viral shedding, but does not disrupt chains of airborne transmission for the 2009 pandemic H1N1 virus in ferrets
mBio, Septer, K. M., Heinly, T. A., Sim, D. G., Patel, D. R., Roder, A. E., Wang, W., Chung, M., Johnson, K. E.E., Ghedin, E., Sutton, Troy, 2024

Inhibition of heme-thiolate monooxygenase CYP1B1 prevents hepatic stellate cell activation and liver fibrosis by accumulating trehalose
Science Translational Medicine, Tung, Hung Chun, Kim, Jong Won, Zhu, Junjie, Li, Sihan, Yan, Jiong, Liu, Qing, Koo, Imhoi, Koshkin, Sergei A., Hao, Fuhua, Zhong, Guo, Xu, Meishu, Wang, Zehua, Wang, Jingyuan, Huang, Yixian, Xi, Yue, Cai, Xinran, Xu, Pengfei, Ren, Songrong, Higashiyama, Takanobu, Gonzalez, Frank J., Li, Song, Isoherranen, Nina, Yang, Da, Ma, Xiaochao, Patterson, Andrew D., Xie, Wen, 2024

Elevated systemic total bile acids escalate susceptibility to alcohol-associated liver disease
iScience, Paudel, Devendra, Hao, Fuhua, Goand, Umesh K., Tian, Sangshan, Koehle, Anthony M., Nguyen, Loi V., Tian, Yuan, Patterson, Andrew D., Singh, Vishal, 2024

Malignant Melanoma in a Free-Ranging Piebald Elk (Cervus canadensis) from Pennsylvania
Northeastern Naturalist, Sergiou, Andreas S., Banfield, Jeremiah E., Brown, Holly M., Steimling, Corissa A., Luley, Erin, Hattel, Arthur, Bender, Susan J., Brown, Justin D., 2024

Trichinella murrelli identified in red foxes (Vulpes vulpes) in Pennsylvania, USA
Veterinary Parasitology: Regional Studies and Reports, Dubey, Jitender P., Thompson, Peter C., de Araujo, Larissa S., Gupta, Aditya, Kay, Sasha, Kwok, Oliver C.H., Battle, Jaquin, Van Why, Kyle, Brown, Justin D., Rosenthal, Benjamin M., 2024

Trichinella murrelli Pozio and La Rosa, 2000 in a Gray Fox (Urocyon cinereoargenteus) from Pennsylvania: A New Host Record for This Zoonotic Nematode
Journal of Parasitology, Thompson, P. C., Araujo, L. S.de, Gupta, A., Kay, S., Kwok, O. C.H., Battle, J., Van Why, K., Brown, J. D., Rosenthal, B. M., Dubey, J. P., 2024

High Cannabigerol Hemp Extract Moderates Colitis and Modulates the Microbiome in an Inflammatory Bowel Disease Model
Journal of Pharmacology and Experimental Therapeutics, Anderson, Benjamin, Sepulveda, Diana, Nachnani, Rahul, Cortez-Resendiz, Alonso, Coates, Matthew, Beckett, Aviauna, Bisanz, J, Beckett, A, Raup-Konsavage, W, Bisanz, Jordan, Kellogg, Joshua, Raup-Konsavage, Wesley, 2024

Submitting Poultry Cases to the Animal Diagnostic Lab
Penn State Extension Website, Bubka, Dana, Niel, K, Lighty, Megan, 2024

Understanding Poultry Medication Regulations
Penn State Extension Website, Bubka, Dana, Niel, K, Lighty, Megan, 2024

Correction to: Interferon subverts an AHR–JUN axis to promote CXCL13+ T cells in lupus (Nature, (2024), 631, 8022, (857-866), 10.1038/s41586-024-07627-2)
Nature, Law, Calvin, Wacleche, Vanessa Sue, Cao, Ye, Pillai, Arundhati, Sowerby, John, Hancock, Brandon, Horisberger, Alice, Bracero, Sabrina, Skidanova, Viktoriya, Li, Zhihan, Adejoorin, Ifeoluwakiisi, Dillon, Eilish, Benque, Isaac J., Nunez, Diana Pena, Simmons, Daimon P., Keegan, Joshua, Chen, Lin, Baker, Tina, Brohawn, Phillip Z., Al-Mossawi, Hussein, Hao, Ling Yang, Jones, Brian, Rao, Navin, Qu, Yujie, Alves, Stephen E., Wyse, Aaron, Cordle, Andrew, Zhu, Zhu, Zhang, Fan, Xiao, Qian, Weisman, Michael, Weisenfeld, Dana, Weinand, Kathryn, Wei, Kevin, Watts, Gerald F.M., Utz, Paul J., Tabechian, Darren, Smith, Melanie, Slowikowski, Kamil, Singaraju, Anvita, Scheel-Toellner, Dagmar, Seifert, Jennifer A., Sakaue, Saori, Sahbudin, Ilfita, Rumker, Laurie, Robinson, William H., Rivellese, Felice, Ritchlin, Christopher, Reshef, Yakir, Raza, Karim, 2024

Effects of Early Life Exposures to the Aryl Hydrocarbon Receptor Ligand TCDF on Gut Microbiota and Host Metabolic Homeostasis in C57BL/6J Mice
Environmental Health Perspectives, Tian, Yuan, Rimal, Bipin, Bisanz, Jordan E., Gui, Wei, Wolfe, Trenton M., Koo, Imhoi, Murray, Iain Alexander, Nettleford, Shaneice K., Yokoyama, Shigetoshi, Dong, Fangcong, Koshkin, Sergei, Prabhu, K. Sandeep, Turnbaugh, Peter J., Walk, Seth T., Perdew, Gary H., Patterson, Andrew D., 2024

Modulation of Ceramide-Induced Apoptosis in Enteric Neurons by Aryl Hydrocarbon Receptor Signaling: Unveiling a New Pathway beyond ER Stress
International Journal of Molecular Sciences, Anitha, Mallappa, Kumar, Supriya M., Koo, Imhoi, Perdew, Gary H., Srinivasan, Shanthi, Patterson, Andrew D., 2024

Effect of Hemp Extraction Procedures on Cannabinoid and Terpenoid Composition
Plants, Chacon, Francisco T., Raup-Konsavage, Wesley, Vrana, Kent, Kellogg, Joshua, 2024

Defining the Role of Mutations Linked to Transmission of H7N9 Viruses in Ferrets.
Proceedings of NIAID Centers of Excellence for Influenza Research and Response 3rd Annual Conference, Patel, Devanshi, Sutton, Troy, 2024

Pre-existing immunity to seasonal influenza viruses reduces the severity of H5N1 infection in ferrets.
Proceedings of NIAID Centers of Excellence for Influenza Research and Response 3nd Annual Conference, Restori, K, Sutton, Troy, 2024

Combined immunity to hemagglutinin and neuraminidase induced by vaccination or infection results in additive reductions in airborne transmission of the 2009 pandemic H1N1 virus in ferrets
Proceedings of NIAID Centers of Excellence for Influenza Research and Response 3rd Annual Conference, Septer, K, Heinly, T, Sim, D, Patel, D, Roder, A, Wang, W, Chung, M, Johnson KEE, None, Ghedin, E, Sutton, Troy, 2024

Respiratory distress and mortality in broiler chickens
Journal of the American Veterinary Medical Association, Elissa, Jonathan, Niel, K, Lighty, Megan, 2024

Decoupling Fluorous Protein Coatings Yield Heat-Stable and Intrinsically Sterile Bioformulations
ACS applied materials & interfaces, Singh, Harminder, Lawanprasert, Atip, Utkarsh, None, Pimcharoen, Sopida, Dewan, Arshiya, Rahoi, Dane, Kirimanjeswara, Girish S., Medina, Scott H., 2024

RAS-activated PI3K/AKT signaling sustains cellular senescence via P53/P21 axis in experimental models of psoriasis
Journal of Dermatological Science, Mercurio, Laura, Bailey, Jacob, Glick, Adam Bleier, Dellambra, Elena, Scarponi, Claudia, Pallotta, Sabatino, Albanesi, Cristina, Madonna, Stefania, 2024

Interferon subverts an AHR–JUN axis to promote CXCL13⁺ T cells in lupus
Nature, Law, Calvin, Wacleche, Vanessa Sue, Cao, Ye, Pillai, Arundhati, Sowerby, John, Hancock, Brandon, Horisberger, Alice, Bracero, Sabrina, Skidanova, Viktoriya, Li, Zhihan, Adejoorin, Ifeoluwakiisi, Dillon, Eilish, Benque, Isaac J., Nunez, Diana Pena, Simmons, Daimon P., Keegan, Joshua, Chen, Lin, Baker, Tina, Brohawn, Phillip Z., Al-Mossawi, Hussein, Hao, Ling Yang, Jones, Brian, Rao, Navin, Qu, Yujie, Alves, Stephen E., Albrecht, Jennifer, Anolik, Jennifer H., Apruzzese, William, Barnas, Jennifer L., Bathon, Joan M., Ben-Artzi, Ami, Boyce, Brendan F., Boyle, David L., Bridges, S. Louis, Bykerk, Vivian P., Campbell, Debbie, Ceponis, Arnold, Chicoine, Adam, Curtis, Michelle, Deane, Kevin D., DiCarlo, Edward, Donlin, Laura T., Dunn, Patrick, Filer, Andrew, Carr, Hayley, Firestein, Gary S., Forbess, Lindsy, Geraldino-Pardilla, Laura, Goodman, Susan M., Gravallese, Ellen M., 2024

Antibodies to Influenza A(H5N1) Virus in Hunting Dogs Retrieving Wild Fowl, Washington, USA
Emerging Infectious Diseases, Brown, Justin D., Black, Adam, Haman, Katherine H., Diel, Diego G., Ramirez, Vickie E., Ziejka, Rachel S., Fenelon, Hannah T., Rabinowitz, Peter M., Stevens, Lila, Poulson, Rebecca, Stallknecht, David E., 2024

Rapid Point-Of-Care Testing for Detection of Antibodies to Toxoplasma gondii in Black Vultures and Ring-Billed Gulls from Pennsylvania
Journal of Parasitology, Von Dohlen, Alexa Rosypal, Randall, Sydney, Grays, Jordyan, Dugo, Mark A., Hunt, Brian J., Brown, Justin, Van Why, Kyle, Ammar, Sawsan, Gerhold, Richard, 2024

Activation of Peroxisome Proliferator-Activated Receptor-β/δ (PPARβ/δ) in Keratinocytes by Endogenous Fatty Acids
Biomolecules, Zhu, Bokai, Zhu, Xiaoyang, Borland, Michael G., Ralph, Douglas H., Chiaro, Christopher R., Krausz, Kristopher W., Ntambi, James M., Glick, Adam B., Patterson, Andrew D., Perdew, Gary H., Gonzalez, Frank J., Peters, Jeffrey M., 2024

Risk assessment of a highly pathogenic H5N1 influenza virus from mink
Nature Communications, Restori, Katherine H., Septer, Kayla M., Field, Cassandra J., Patel, Devanshi R., VanInsberghe, David, Raghunathan, Vedhika, Lowen, Anice C., Sutton, Troy C., 2024

Influence of hydrometeorological risk factors on child diarrhea and enteropathogens in rural Bangladesh
PLoS Neglected Tropical Diseases, Grembi, Jessica, Nguyen, A, Riviere, M, Heitmann, G, Patil, A, Athni, T, Djajadi, S, Ercumen, A, Lin, A, Crider, Y, Mertens, A, Karim, M, Islam, M, Miah, R, Famida, S, Hossen, M, Mutsuddi, P, Ali, S, Rahman, M, Hussain, Z, Shoab, A, Haque, R, Rahman, M, Unicomb, L, Luby, S, Arnold, B, Bennett, A, Benjamin-Chung, J, 2024

The 2022 revised WHO TEFs for dioxins and dioxin-like chemicals: The importance of considering the use of species-specific information to determine relative effective potency for human-based risk assessment
Regulatory Toxicology and Pharmacology, Eaton, David L., Simon, Ted W., Kaminski, Norbert E., Perdew, Gary H., Nebert, Daniel W., 2024

Species differences in specific ligand-binding affinity and activation of AHR: The biological basis for calculation of relative effective potencies and toxic equivalence factors
Regulatory Toxicology and Pharmacology, Eaton, David L., Simon, Ted W., Kaminski, Norbert E., Perdew, Gary H., Nebert, Daniel W., 2024

Dietary carbohydrates regulate intestinal colonization and dissemination of Klebsiella pneumoniae
Journal of Clinical Investigation, Hecht, Aaron L., Harling, Lisa C., Friedman, Elliot S., Tanes, Ceylan, Lee, Junhee, Firrman, Jenni, Hao, Fuhua, Tu, Vincent, Liu, Lin Shu, Patterson, Andrew D., Bittinger, Kyle, Goulian, Mark, Wu, Gary D., 2024

Changes in the type 2 diabetes gut mycobiome associate with metformin treatment across populations
mBio, Van Syoc, Emily, Nixon, Michelle, Silverman, Justin, Lou, Yuhong, Luo, Yuhong, Gonzalez, Frank, Elbere, Ilze, Klovins, Janis, Patterson, Andrew D., Rogers, Connie, Ganda, Erika, 2024

The Potential of Cannabichromene (CBC) as a Therapeutic Agent
Journal of Pharmacology and Experimental Therapeutics, Sepulveda, Diana, Vrana, Kent, Kellogg, Joshua, Bisanz, Jordan, Desai, Dhimant, Graziane, Nicholas M., Raup-Konsavage, Wesley, 2024

Influence of temperature and precipitation on the effectiveness of water, sanitation, and handwashing interventions against childhood diarrheal disease in rural bangladesh: A reanalysis of the WASH benefits Bangladesh trial
Environmental Health Perspectives, Nguyen, A, Grembi, Jessica, Riviere, M, Barratt Heitmann, G, Hutson, W, Athni, T, Patil, A, Ercumen, A, Lin, Audrie, Crider, Y, Mertens, A, Unicomb, L, Rahman, Mahbubur, Luby, S, Arnold, Benjamin, Benjamin-Chung, J, 2024

Exploring vaginal discharge scoring to assess clinical metritis severity: Comparison between intrauterine dextrose and systemic antibiotics treatments
British Veterinary Journal, Hamilton, J., Jimenez, E., Zarei, P., Lection, J., Sorto, R., Hovingh, E., Martinez, M., Bas, S., Barragan, A. A., 2024

Toxoplasma gondii Survey in Waterfowl and Gulls from Eight USA States
Journal of Wildlife Diseases, Ammar, Sawsan, Dawant, Tania J., Kelly, Janetta, Hickling, Graham, Brown, Justin, Van Why, Kyle, Poulson, Rebecca, Su, Chunlei, Gerhold, Richard, 2024

Otterly diverse - A high diversity of Dracunculus species (Spirurida: Dracunculoidea) in North American river otters (Lontra canadensis)
International Journal for Parasitology: Parasites and Wildlife, Yabsley, Michael J., Garrett, Kayla B., Thompson, Alec T., Box, Erin K., Giner, Madeline R., Haynes, Ellen, Barron, Heather, Schneider, Renata M., Coker, Sarah M., Beasley, James C., Borchert, Ernest J., Tumlison, Renn, Surf, Allison, Dukes, Casey G., Olfenbuttel, Colleen, Brown, Justin D., Swanepoel, Liandrie, Cleveland, Christopher A., 2024

Advancing botanical safety: A strategy for selecting, sourcing, and characterizing botanicals for developing toxicological tools
Food and Chemical Toxicology, Waidyanatha, Suramya, Collins, Bradley J., Cristy, Tim, Embry, Michelle, Gafner, Stefan, Johnson, Holly, Kellogg, Josh, Krzykwa, Julie, Li, Siheng, Mitchell, Constance A., Mutlu, Esra, Pickett, Sarah, You, Hong, Van Breemen, Richard, Baker, Timothy R., 2024

The underappreciated diversity of bile acid modifications
Cell, Mohanty, Ipsita, Mannochio-Russo, Helena, Schweer, Joshua V., El Abiead, Yasin, Bittremieux, Wout, Xing, Shipei, Schmid, Robin, Zuffa, Simone, Vasquez, Felipe, Muti, Valentina B., Zemlin, Jasmine, Tovar-Herrera, Omar E., Moraïs, Sarah, Desai, Dhimant, Amin, Shantu, Koo, Imhoi, Turck, Christoph W., Mizrahi, Itzhak, Kris-Etherton, Penny Margaret, Petersen, Kristina, Fleming, Jennifer A., Huan, Tao, Patterson, Andrew D., Siegel, Dionicio, Hagey, Lee R., Wang, Mingxun, Aron, Allegra T., Dorrestein, Pieter C., 2024

Fowl Cholera
Merck Veterinary Manual, Lighty, Megan, 2024

Avian metapneumovirus
Penn State Extension Website, Elissa, Jonathan, Niel, K, Lighty, Megan, 2024

Avian Metapneumovirus
Penn State Extension, Elissa, Jonathan, Niel, Kayla, Lighty, M, 2024

Is detection of enteropathogens and human or animal faecal markers in the environment associated with subsequent child enteric infections and growth: an individual participant data meta-analysis
The Lancet Global Health, Mertens, A, Arnold, Benjamin, Benjamin-Chung, J, Boehm, A, Brown, J, Capone, D, Clasen, T, Fuhrmeister, E, Grembi, Jessica, Holcomb, D, Knee, J, Kwong, L, Lin, Audrie, Luby, S, Nala, R, Nelson, K, Njenga, S, Null, C, Pickering, A, Rahman, Mahbubur, Reese, H, Steinbaum, L, Stewart, J, Thilakaratne, R, Cumming, O, Colford, Jr, J, Ercumen, A, 2024

2022-2023 Toxicological Sciences: Paper of the Year
Toxicological Sciences, Will, Yvonne, Peters, Jeffrey M., 2024

Assessment of the effects of prepartum anti-inflammatory therapies on type 1/type 2 immunity ratio using a rapid blood test
JDS Communications, Spring, J., Huo, Q., Jimenez, E., Martinez, M., Zarei, P., Lection, J., Hovingh, E., Lawhead, J., Sorto Cruz, R. H., Barragan, A. A., 2024

Cold Atmospheric Plasma Medicine: Applications, Challenges, and Opportunities for Predictive Control
Plasma, Nicol, McKayla, Kazemi, Ali, Nicol, Mckayla, Kazemi, Ali, Bilén, Sven G., Kirimanjeswara, Girish S., Bilén, S, Knecht, Sean D., Kirimanjeswara, G, 2024

Intranasal SARS-CoV-2 RBD decorated nanoparticle vaccine enhances viral clearance in the Syrian hamster model
Microbiology spectrum, Patel, Devanshi R., Minns, Allen M., Sim, Derek G., Field, Cassandra J., Kerr, Abigail E., Heinly, Talia A., Luley, Erin H., Rossi, Randall M., Bator, Carol M., Moustafa, Ibrahim M., Norton, Elizabeth B., Hafenstein, Susan L., Lindner, Scott E., Sutton, Troy C., 2024

Immune cell-intrinsic Ah receptor facilitates the expression of antimicrobial REG3G in the small intestine
FASEB Journal, Chakraborty, Debopriya, Coslo, Denise M., Murray, Iain Alexander, Vijay, Anitha, Patterson, Andrew David, Perdew, Gary H., 2024

Reverse metabolomics for the discovery of chemical structures from humans
Nature, Gentry, Emily C., Collins, Stephanie L., Panitchpakdi, Morgan, Belda-Ferre, Pedro, Stewart, Allison K., Carrillo Terrazas, Marvic, Lu, Hsueh Han, Zuffa, Simone, Yan, Tingting, Avila-Pacheco, Julian, Plichta, Damian R., Aron, Allegra T., Wang, Mingxun, Jarmusch, Alan K., Hao, Fuhua, Syrkin-Nikolau, Mashette, Vlamakis, Hera, Ananthakrishnan, Ashwin N., Boland, Brigid S., Hemperly, Amy, Vande Casteele, Niels, Gonzalez, Frank J., Clish, Clary B., Xavier, Ramnik J., Chu, Hiutung, Baker, Erin S., Patterson, Andrew D., Knight, Rob, Siegel, Dionicio, Dorrestein, Pieter C., 2024

microbeMASST: a taxonomically informed mass spectrometry search tool for microbial metabolomics data
Nature Microbiology, Zuffa, Simone, Schmid, Robin, Bauermeister, Anelize, Paulo, Paulo Wender, Caraballo-Rodriguez, Andres M., El Abiead, Yasin, Aron, Allegra T., Gentry, Emily C., Zemlin, Jasmine, Meehan, Michael J., Avalon, Nicole E., Cichewicz, Robert H., Buzun, Ekaterina, Terrazas, Marvic Carrillo, Hsu, Chia Yun, Oles, Renee, Ayala, Adriana Vasquez, Zhao, Jiaqi, Chu, Hiutung, Kuijpers, Mirte C.M., Jackrel, Sara L., Tugizimana, Fidele, Nephali, Lerato Pertunia, Dubery, Ian A., Madala, Ntakadzeni Edwin, Moreira, Eduarda Antunes, Costa-Lotufo, Leticia Veras, Lopes, Norberto Peporine, Rezende-Teixeira, Paula, Jimenez, Paula C., Rimal, Bipin, Patterson, Andrew D., Traxler, Matthew F., Pessotti, Rita de Cassia, Alvarado-Villalobos, Daniel, Tamayo-Castillo, Giselle, Chaverri, Priscila, Escudero-Leyva, Efrain, Quiros-Guerrero, Luis Manuel, Bory, Alexandre Jean, Joubert, Juliette, Rutz, Adriano, Wolfender, Jean Luc, Allard, Pierre Marie, Sichert, Andreas, Pontrelli, Sammy, Pullman, Benjamin S., Bandeira, Nuno, Gerwick, William H., Gindro, Katia, Massana-Codina, Josep, Wagner, Berenike C., Forchhammer, Karl, Petras, Daniel, Aiosa, Nicole, Garg, Neha, Liebeke, Manuel, Bourceau, Patric, Kang, Kyo Bin, Gadhavi, Henna, de Carvalho, Luiz Pedro Sorio, Silva dos Santos, Mariana, Pérez-Lorente, Alicia Isabel, Molina-Santiago, Carlos, Romero, Diego, Franke, Raimo, Brönstrup, Mark, Vera Ponce de León, Arturo, Pope, Phillip Byron, La Rosa, Sabina Leanti, La Barbera, Giorgia, Roager, Henrik M., Laursen, Martin Frederik, Hammerle, Fabian, Siewert, Bianka, Peintner, Ursula, Licona-Cassani, Cuauhtemoc, Rodriguez-Orduña, Lorena, Rampler, Evelyn, Hildebrand, Felina, Koellensperger, Gunda, Schoeny, Harald, Hohenwallner, Katharina, Panzenboeck, Lisa, Gregor, Rachel, O’Neill, Ellis Charles, Roxborough, Eve Tallulah, Odoi, Jane, Bale, Nicole J., Ding, Su, Sinninghe Damsté, Jaap S., Guan, Xue Li, Cui, Jerry J., Ju, Kou San, Silva, Denise Brentan, Silva, Fernanda Motta Ribeiro, da Silva, Gilvan Ferreira, Koolen, Hector H.F., Grundmann, Carlismari, Clement, Jason A., Mohimani, Hosein, Broders, Kirk, McPhail, Kerry L., Ober-Singleton, Sidnee E., Rath, Christopher M., McDonald, Daniel, Knight, Rob, Wang, Mingxun, Dorrestein, Pieter C., 2024

Magnetic field and ultrasound induced simultaneous wireless energy harvesting
Energy and Environmental Science, Karan, Sumanta Kumar, Hosur, Sujay, Kashani, Zeinab, Leng, Haoyang, Vijay, Anitha, Sriramdas, Rammohan, Wang, Kai, Poudel, Bed, Patterson, Andrew D., Kiani, Mehdi, Priya, Shashank, 2024

Goldenseal (Hydrastis canadensis L.) Extracts Inhibit the Growth of Fungal Isolates Associated with American Ginseng (Panax quinquefolius L.)
Molecules, Gao, Ying, Swiggart, Ethan, Wolkiewicz, Kaela, Liyanapathiranage, Prabha, Baysal-Gurel, Fulya, Avin, Farhat, Lopez, Eleanor, Jordan, Rebecca, Kellogg, Joshua, Burkhart, Eric, 2024

Near-Infrared Induced miR-34a Delivery from Nanoparticles in Esophageal Cancer Treatment
Advanced healthcare materials, Alden, Nick, Yeingst, Tyus, Pfeiffer, Hanna, Celik, Nazmiye, Arrizabalaga, Julien, Helton, Angelica, Liu, Yiming, Stairs, Douglas B., Glick, Adam B., Goyal, Neerav, Hayes, Daniel J., 2024

IRE1alpha Regulates ROS and Immune Responses after UV Irradiation
Redox Experimental Medicine, Glick, Adam, 2024

Priority screening of contaminants of emerging concern (CECs) in surface water: Comparing cell-based bioassays and exposure-activity ratios (EARs)
Science of the Total Environment, Vanden Heuvel, John P., Granda, Megan, Ferguson, Francesca, Glaberman, Scott R., Preisendanz, Heather E., 2024

Bile salt hydrolase catalyses formation of amine-conjugated bile acids
Nature, Bisanz, J, Rimal, Bipin, Collins, Stephanie, Weinert, Emily, Tanes, Ceylan, Patterson, A, Granda, Megan, Koo, Imhoi, Rocha, E, Solanka, Sumeet, Granda, M, Hoque, Nushrat, Solanki, Sumeet, Hoque, Nushrat, Gentry, Emily, Gentry, Emily, Yan, Tingting, Koo, Imhoi, Reilly, Erin, Krausz, Kristopher, Desai, Dhimant, Hao, Fuhua, Amin, Shantu, Paudel, Devendra, Rocha, Edson, Singh, Vishal, Coleman, James, Yan, Tingting, Shah, Yatrik, Kim, Min, Bittinger, Kyle, Gonzalez, Frank, Vanden Heuvel, John, Zackular, Joseph, Krausz, Kristopher, Patterson, A, Desai, Dhimant, Amin, Shantu, Coleman, James, Shah, Yatrik, Bisanz, Jordan, Gonzalez, Frank, Heuvel, John, Vanden Heuvel, John P., Wu, Gary, Zemel, Babette, Dorrestein, Pieter, Patterson, Andrew, 2024

Surgery for Crohn's Disease Is Associated With a Dysbiotic Microbiome and Metabolome: Results From Two Prospective Cohorts
Cellular and Molecular Gastroenterology and Hepatology, Lewis, James D., Daniel, Scott G., Li, Hongzhe, Hao, Fuhua, Patterson, Andrew D., Hecht, Aaron L., Brensinger, Colleen M., Wu, Gary D., Bittinger, Kyle, Wolf, Douglas C., Hron, Bridget, Hanson, John S., Mohanty, Sanjib P., Fogel, Ronald P., Levy, L. Campbell, Iskandar, Heba N., Fischer, Monika, Cohen, Benjamin, Swaminath, Arun, Kane, Sunanda, McCabe, Robert P., Yen, Eugene F., Hanauer, Stephen B., Hudesman, David P., Afzali, Anita, Kelly, Colleen, Weber, John R., Mahadevan, Uma, Herfarth, Hans, Katz, Jeffery, Taleban, Sasha, Rubin, David T., Yachyshyn, Bruce, Reynolds, Gorman J., Gerich, Mark, Dryden, Gerald W., Quezada, Sandra, Higgins, Peter D.R., Shmidt, Eugenia, Schwartz, Marc B., Flynn, Ann D., Saha, Sumona, Horst, Sara N., Chiorean, Michael, Green, Patrick D., Scherl, Ellen J., Sandler, Robert, Brotherton, Carol, Albenberg, Lindsey, Valentine, John F., 2024

Human Intestinal Microbiome Determines Individualized Inflammatory Response to Dietary Emulsifier Carboxymethylcellulose Consumption
Cellular and Molecular Gastroenterology and Hepatology, Daniel, Noëmie, Wu, Gary D., Walters, William, Compher, Charlene, Ni, Josephine, Delaroque, Clara, Albenberg, Lindsey, Ley, Ruth E., Patterson, Andrew D., Lewis, James D., Gewirtz, Andrew T., Chassaing, Benoit, 2024

Sex Dimorphic Effects of Bile Acid Metabolism in Liver Cancer in Mice
Cellular and Molecular Gastroenterology and Hepatology, Golonka, Rachel M., Yeoh, Beng San, Saha, Piu, Tian, Yuan, Chiang, John Y.L., Patterson, Andrew D., Gewirtz, Andrew T., Joe, Bina, Kumar, Matam Vijay, 2024

Dietary fiber guar gum-induced shift in gut microbiota metabolism and intestinal immune activity enhances susceptibility to colonic inflammation
Gut Microbes, Paudel, Devendra, Nair, Divek V.T., Tian, Sangshan, Hao, Fuhua, Goand, Umesh K., Joseph, Grace, Prodes, Eleni, Chai, Zhi, Robert, Chloé E.M., Chassaing, Benoit, Patterson, Andrew D., Singh, Vishal, 2024

A comprehensive epidemiological approach documenting an outbreak of H5N1 highly pathogenic avian influenza virus clade 2.3.4.4b among gulls, terns, and harbor seals in the Northeastern Pacific
Frontiers in Veterinary Science, Haman, Katherine H., Pearson, Scott F., Brown, Justin, Frisbie, Lauren A., Penhallegon, Sara, Falghoush, Azeza M., Wolking, Rebecca M., Torrevillas, Brandi K., Taylor, Kyle R., Snekvik, Kevin R., Tanedo, Sarah A., Keren, Ilai N., Ashley, Elizabeth A., Clark, Casey T., Lambourn, Dyanna M., Eckstrand, Chrissy D., Edmonds, Steven E., Rovani-Rhoades, Emma R., Oltean, Hanna, Wilkinson, Kristin, Fauquier, Deborah, Black, Allison, Waltzek, Thomas B., 2024

Diversity of Babesia spp. in skunks from selected states in the United States of America
Parasite, Garrett, Kayla B., Brown, Justin, Gabriel, Mourad, Dowler, Robert, Perkins, J. Clint, Krejsa, Dianna, Yabsley, Michael J., 2024

Prevalence and diversity of Babesia spp. in wildlife in the eastern United States.
International Journal of Parasitology: Parasites and Wildlife, Baker, Eliza, Dennis, Michelle, Jensen, Alex, Garrett, Kayla, Cleveland, Christopher, Yabsley, Michael, Brown, Justin, Van Why, Kyle, Gerhold, Richard, 2024

Patterns of estimated prevalence of bot fly larvae in harvested squirrels in Pennsylvania.
Northeast Naturalist, Johnson, Joshua, Boyd, Emily, Weaver, Melanie, Brown, Justin, 2024

Resolution of Clinical Signs of Sarcoptic Mange in American Black Bears (Ursus americanus), in Ivermectin-Treated and Nontreated Individuals
Journal of Wildlife Diseases, Tiffin, Hannah, Brown, Justin D., Ternent, Mark, Snavely, Brandon, Carrollo, Emily, Kibe, Ethan, Buderman, Frances E., Mullinax, Jennifer Koehl, Machtinger, Erika T., 2024

Use of intrauterine dextrose as an alternative to systemic antibiotics for treatment of clinical metritis in dairy cattle: a microbiome perspective
Frontiers in Veterinary Science, Lection, Jennine, Van Syoc, Emily, Miles, Asha, Hamilton, Julia, Martinez, Marcela, Bas, Santiago, Silverman, Justin, Barragan, Adrian, Ganda, Erika, 2024

Three Ecological Models to Evaluate the Effectiveness of Trichoderma spp. for Suppressing Aflatoxigenic Aspergillus flavus and Aspergillus parasiticus
Toxins, Voloshchuk, Nataliia, Irakoze, Zilfa, Kang, S, Kellogg, Joshua J., Wee, Josephine, 2024

Plant-associated volatile organic compound (VOC) database (PVD): A resource supporting research on VOCs produced by plants and plant-associated microbes
Phytofrontiers, Shao, Danying, Schlagnhaufer, Carl, Bandara, Ananda, Esker, Paul, Kim, Seong, Kellogg, Joshua, Jang, Jisoo, Kang, S, 2024

Diagnostic investigation of avian reovirus field variants circulating in broiler chickens in Pennsylvania of United States between 2017 and 2022
Avian Pathology, Shabbir, Muhammad Zubair, Yu, Haiyang, Lighty, Megan E., Dunn, Patricia, Wallner-Pendleton, Eva A., Lu, Huaguang, 2024

Seroprevalence and risk factors for brucellosis amongst livestock and humans in a multi-herd ranch system in Kagera, Tanzania
Frontiers in Public Health, Hudson, Peter, Lyimo, Beatus, Hugho, Ephrasia, Mathew, Coletha, Mayenga, Charles, Lukambagire, Abdul Hamid, Lyimo, Samson, Munuo, Lidia, Byukusenge, Maurice, Withall, Jodie, Ashford, Roland T., Mmbaga, Blandina T., Makondo, Zachariah, McGiven, John, Radzio-Basu, Jessica, Ganda, Erika, Middlebrook, Earl A., Bartlow, Andrew W., Fair, Jeanne M., Shirima, Gabriel, Sriranganathan, Nammalwar, Kazwala, Rudovick R., Cattadori, Isabella M., Kapur, Vivek, Buza, Joram J., Katani, Robab, 2024

Klebsiella pneumoniae in stranded California sea lions (Zalophus californianus) of Central California between 2017-2022
Frontiers in Marine Science, Zotto, Sydney N., Dunkin, Robin C., Limon, Juliana D., Smith, Maia S., Hortensius, Lisabet M., Martinez, Margaret E., Duignan, Pádraig J., Field, Cara, Soto, Esteban, Whitaker, Dane, Rios, Carlos, Byukusenge, Maurice, Jayarao, Bhushan, Kuchipudi, Suresh V., Kinsley, Amy C., 2024

Elevated mortality in 3-week-old commercial broiler chickens
Journal of the American Veterinary Medical Association, Niel, Kayla, Elissa, Jonathan, Lighty, Megan, 2023

Bile salt hydrolase in non-enterotoxigenic Bacteroides potentiates colorectal cancer
Nature Communications, Sun, Lulu, Zhang, Yi, Cai, Jie, Rimal, Bipin, Rocha, Edson R., Coleman, James P., Zhang, Chenran, Nichols, Robert G., Luo, Yuhong, Kim, Bora, Chen, Yaozong, Krausz, Kristopher W., Harris, Curtis C., Patterson, Andrew D., Zhang, Zhipeng, Takahashi, Shogo, Gonzalez, Frank J., 2023

Association between hyperketolactia and production in early-lactating dairy cows
Journal of Dairy Science, Kowalski, Z. M., Sabatowicz, M., Van Saun, R. J., Młocek, W., Jagusiak, W., Spanghero, M., Dechow, C. D., 2023

Hepatozoon spp. infection in wild canids in the eastern United States
Parasites and Vectors, Baker, Eliza, Jensen, Alex, Miller, Debra, Garrett, Kayla Buck, Cleveland, Christopher A., Brown, Justin, Van Why, Kyle, Gerhold, Richard, 2023

Acute Myeloid Leukemia Causes T Cell Exhaustion and Depletion in a Humanized Graft-versus-Leukemia Model
Journal of Immunology, Jia, Bei, Zhao, Chenchen, Minagawa, Kentaro, Shike, Hiroko, Claxton, David F., Ehmann, W. Christopher, Rybka, Witold B., Mineishi, Shin, Wang, Ming, Schell, Todd D., Prabhu, K. Sandeep, Paulson, Robert F., Zhang, Yi, Shultz, Leonard D., Zheng, Hong, 2023

Third generation quinoline-3-carboxamide transcriptional disrupter of HDAC4, HIF-1α, and MEF-2 signaling for metastatic castration-resistant prostate cancer
Prostate, Isaacs, John T., Dalrymple, Susan L., Antony, Lizamma, Marc Rosen, David, Coleman, Ilsa M., Nelson, Peter S., Kostova, Maya, Murray, Iain A., Perdew, Gary H., Denmeade, Samuel R., Akinboye, Emmanuel S., Brennen, W. Nathaniel, 2023

Trace Minerals in Ruminant Production Systems
Veterinary Clinics of North America - Food Animal Practice, Swecker, William S., Van Saun, Robert J., 2023

Trace Mineral Metabolism: The Maternal-Fetal Bond
Veterinary Clinics of North America - Food Animal Practice, Van Saun, Robert J., 2023

Trace Mineral Nutrition of Sheep
Veterinary Clinics of North America - Food Animal Practice, Van Saun, Robert J., 2023

Trace Mineral Supplementation for Beef Cows: Dry Range Environment
Veterinary Clinics of North America - Food Animal Practice, Sager, Bob, Van Saun, Robert J., 2023

The impact of beef sire breed on dystocia, stillbirth, gestation length, health, and lactation performance of cows that carry beef × dairy calves
Journal of Dairy Science, Basiel, Bailey, Barragan, A. A., Felix, T. L., Dechow, C. D., 2023

Human TLR8 induces inflammatory bone marrow erythromyeloblastic islands and anemia in SLE-prone mice
Life Science Alliance, Maria, Naomi I., Papoin, Julien, Raparia, Chirag, Sun, Zeguo, Josselsohn, Rachel, Lu, Ailing, Katerji, Hani, Syeda, Mahrukh M., Polsky, David, Paulson, Robert, Kalfa, Theodosia, Barnes, Betsy J., Zhang, Weijia, Blanc, Lionel, Davidson, Anne, 2023

Toxicity and chemical composition of commercial road palliatives versus oil and gas produced waters
Environmental Pollution, Farnan, James, Vanden Heuvel, John P., Dorman, Frank L., Warner, Nathaniel R., Burgos, William D., 2023

Genome-Wide Analysis of Escherichia coli Isolated from Dairy Animals Identifies Virulence Factors and Genes Enriched in Multidrug-Resistant Strains
Antibiotics, Haley, Bradd J., Kim, Seon Woo, Salaheen, Serajus, Hovingh, Ernest, Van Kessel, Jo Ann S., 2023

A methoxylated flavone from Artemisia afra kills Mycobacterium tuberculosis
BioRXiv, Kellogg, Josh, Alonso, Maria, Jordan, R, Xiao, Junpei, Cafiero, Juan, Bush, Trevor, Towler, Melissa, Weathers, Pamela, Shell, Scarlet, 2023

Induction of AHR Signaling in Response to the Indolimine Class of Microbial Stress Metabolites
Metabolites, Patel, Dhwani, Murray, Iain A., Dong, Fangcong, Annalora, Andrew J., Gowda, Krishne, Coslo, Denise M., Krzeminski, Jacek, Koo, Imhoi, Hao, Fuhua, Amin, Shantu G., Marcus, Craig B., Patterson, Andrew D., Perdew, Gary H., 2023

Characterization of Mutations Enriched During Sequential Transmission of H7N9 Influenza Virus in Ferrets
Proceedings of NIAID Centers of Excellence for Influenza Research and Response 2nd Annual Conference, Sutton, Troy, 2023

Accumulation of Linoleic Acid by Altered Peroxisome Proliferator-Activated Receptor-α Signaling Is Associated with Age-Dependent Hepatocarcinogenesis in Ppara Transgenic Mice
Metabolites, Zhu, Xiaoyang, Liu, Qing, Patterson, Andrew D., Sharma, Arun K., Amin, Shantu G., Cohen, Samuel M., Gonzalez, Frank J., Peters, Jeffrey M., 2023

A comparison of high- and low-resolution gas chromatography–mass spectrometry for herbal product classification: A case study with Ocimum essential oils
Phytochemical Analysis, Abraham, Evelyn J., Wallace, E. Diane, Kellogg, Joshua J., 2023

Activation of GPR44 decreases severity of myeloid leukemia via specific targeting of leukemia initiating stem cells
Cell Reports, Qian, Fenghua, Nettleford, Shaneice K., Zhou, Jiayan, Arner, Brooke E., Hall, Molly A., Sharma, Arati, Annageldiyev, Charyguly, Rossi, Randy M., Tukaramrao, Diwakar B., Sarkar, Deborpita, Hegde, Shailaja, Gandhi, Ujjawal H., Finch, Emily R., Goodfield, Laura, Quickel, Michael D., Claxton, David F., Paulson, Robert F., Prabhu, K. Sandeep, 2023

Alpha-tocopherylquinone differentially modulates claudins to enhance intestinal epithelial tight junction barrier via AhR and Nrf2 pathways
Cell Reports, Ganapathy, A, Saha, K, Wang, A, Arumugam, P, Dharmaprakash, V, Yochum, Gregory, Koltun, Walter, Nighot, M, Perdew, Gary H., Thompson, T, Ma, Thomas, Nighot, Prashant, 2023

The selenoprotein P-LRP5/6-WNT3A complex promotes tumorigenesis in sporadic colorectal cancer
Journal of Clinical Investigation, Prabhu, K. Sandeep, 2023

Molecular networking identifies an AHR-modulating benzothiazole from white button mushrooms (Agaricus bisporus)
Journal of Functional Foods, Chen, Xiaoling, Patterson, Andrew D., Perdew, Gary H., Murray, Iain A., Kellogg, Joshua J., 2023

Complex chemical signals dictate Ah receptor activation through the gut-lung axis
FASEB Journal, Dong, Fangcong, Murray, Iain A., Annalora, Andrew, Coslo, Denise M., Desai, Dhimant, Gowda, Krishne, Yang, Jian, Wang, Dingbowen, Koo, Imhoi, Hao, Fuhua, Amin, Shantu G., Patterson, Andrew D., Marcus, Craig, Perdew, Gary H., 2023

Ruminant Metabolic Diseases: Perturbed Homeorhesis
Veterinary Clinics of North America - Food Animal Practice, Van Saun, Robert J., 2023

Pregnancy Toxemia in Sheep and Goats
Veterinary Clinics of North America - Food Animal Practice, Mongini, Andrea, Van Saun, Robert J., 2023

Ruminant Metabolic Diseases
Veterinary Clinics of North America - Food Animal Practice, Van Saun, Robert J., 2023

Poultry Cannibalism: Prevention and Treatment
Penn State Extension, Niel, Kayla, 2023

Genomic diversity of antimicrobial-resistant and Shiga toxin gene-harboring non-O157 Escherichia coli from dairy calves
Journal of Global Antimicrobial Resistance, Salaheen, Serajus, Kim, Seon Woo, Springer, Hayley R., Hovingh, Ernest P., Van Kessel, Jo Ann S., Haley, Bradd J., 2023

Characterization of Antimicrobial Resistance Genes and Virulence Factors in the Genomes of Escherichia coli ST69 Isolates from Preweaned Dairy Calves and Their Phylogenetic Relationship with Poultry and Human Clinical Strains
Microbial Drug Resistance, Salaheen, Serajus, Kim, Seon Woo, Springer, Hayley R., Hovingh, Ernest P., Van Kessel, Jo Ann S., Haley, Bradd J., 2023

Complete Genome Sequence of a Bovine Coronavirus Isolated from a Goat in Pennsylvania, USA
Genome Announcements, Chothe, Shubhada, Byukusenge, Maurice, Sekhwal, Manoj, Li, L, LaBella, Lindsey, Jakka, Padmaja, Palchak, Kay, Barry, Rhiannon, Yon, Michele, Nissly, Ruth H., Kelly, Kathleen, Jayarao, Bhushan M., Nair, Meera, Kuchipudi, Suresh Varma, 2023

Prevention the Best Medicine for Poultry Farmers
Lancaster Farming, Lighty, Megan, 2023

Human metabolome variation along the upper intestinal tract
Nature Metabolism, Folz, J, Culver, R, Morales, J, Grembi, Jessica, Triadafilopoulos, G, Relman, D, Huang, K, Shalon, D, Fiehn, O, 2023

Profiling the human intestinal environment under physiological conditions
Nature, Shalon, Dari, Culver, Rebecca Neal, Grembi, Jessica A., Folz, Jacob, Treit, Peter V., Shi, Handuo, Rosenberger, Florian A., Dethlefsen, Les, Meng, Xiandong, Yaffe, Eitan, Aranda-Díaz, Andrés, Geyer, Philipp E., Mueller-Reif, Johannes B., Spencer, Sean, Patterson, Andrew D., Triadafilopoulos, George, Holmes, Susan P., Mann, Matthias, Fiehn, Oliver, Relman, David A., Huang, Kerwyn Casey, 2023

Little Brown Bats (Myotis lucifugus) Support the Binding of SARS-CoV-2 Spike and Are Likely Susceptible to SARS-CoV-2 Infection
Viruses, Chothe, Shubhada K., Jakka, Padmaja, Boorla, Veda Sheersh, Ramasamy, Santhamani, Gontu, Abhinay, Nissly, Ruth H., Brown, Justin, Turner, Gregory, Sewall, Brent J., Reeder, Dee Ann M., Field, Kenneth A., Engiles, Julie B., Amirthalingam, Saranya, Ravichandran, Abirami, LaBella, Lindsey, Nair, Meera Surendran, Maranas, Costas D., Kuchipudi, Suresh V., 2023

USE OF A POINT OF CARE TEST TO DETERMINE THE PREVALENCE OF ANTIBODIES TO TOXOPLASMA GONDII IN BLACK BEARS FROM NORTH CAROLINA AND PENNSYLVANIA
Journal of Parasitology, Strules, Jennifer, Dawant, Tania, Riese, Katie, Gerhold, Richard, Brown, Justin, Olfenbuttel, Colleen, DePerno, Christopher S., Hunt, Brian J., von Dohlen, Alexa Rosypal, 2023

Interaction Metabolomics to Discover Synergists in Natural Product Mixtures
Journal of Natural Products, Vidar, Warren S., Baumeister, Tim U.H., Caesar, Lindsay K., Kellogg, Joshua J., Todd, Daniel A., Linington, Roger G., M. Kvalheim, Olav, Cech, Nadja B., 2023

Vaccination for Highly Pathogenic Avian Influenza (HPAI)
Penn State Extension, Niel, K, Lighty, Megan, Elissa, Jonathan, 2023

Vaccination for Highly Pathogenic Avian Influenza
Penn State Extension, Niel, Kayla, Lighty, M, Elissa, Jonathan, 2023

Two lineages of immune cells that differentially express the vitamin D receptor
Journal of Steroid Biochemistry and Molecular Biology, Cantorna, Margherita T., Arora, Juhi, 2023

Highlights from the 24th workshop on vitamin D in Austin, September 2022
Journal of Steroid Biochemistry and Molecular Biology, Meyer, Mark B., Bernal-Mizrachi, Carlos, Bikle, Daniel D., Biyani, Madhu, Campbell, Moray J., Chaudhari, Snehal N., Christakos, Sylvia, Ingles, Sue A., Knuth, Megan M., Lee, Seong Min, Lisse, Thomas S., Liu, Eva S., Piec, Isabelle, Plum, Lori A., Rao, Sudhaker D., Reynolds, Carmen J., Thacher, Tom D., White, John H., Cantorna, Margherita T., 2023

Selenoprotein W Ameliorates Experimental Colitis and Promotes Intestinal Epithelial Repair
Antioxidants, Nettleford, Shaneice K., Liao, Chang, Short, Sarah P., Rossi, Randall M., Singh, Vishal, Prabhu, K. Sandeep, 2023

Echinococcus Species Infections among Wild Canids in Pennsylvania, USA
Journal of Wildlife Diseases, Garrett, Kayla, Brown, Justin, Grunert, Ryan K.A., Hunte, Jonathan, Ruder, Mark G., Van Why, Kyle, Yabsley, Michael J., Cleveland, Christopher A., 2023

The balance between gasdermin D and STING signaling shapes the severity of schistosome immunopathology
Proceedings of the National Academy of Sciences of the United States of America, Kalantari, Parisa, Shecter, Ilana, Hopkins, Jacob, Gois, Andrea Pilotta, Morales, Yoelkys, Harandi, Bijan F., Sharma, Shruti, Stadecker, Miguel J., 2023

Nitric oxide regulates metabolism in murine stress erythroid progenitors to promote recovery during inflammatory anemia.
bioRxiv : the preprint server for biology, Ruan, B, Chen, Y, Trimidal, S, Koo, I, Qian, F, Cai, J, Mcguigan, J, Hall, M, Patterson, Andrew, Prabhu, K, Paulson, R, 2023

The Ah Receptor from Toxicity to Therapeutics: Report from the 5th AHR Meeting at Penn State University, USA, June 2022
International Journal of Molecular Sciences, Perdew, Gary H., Esser, Charlotte, Snyder, Megan, Sherr, David H., van den Bogaard, Ellen H., McGovern, Karen, Fernández-Salguero, Pedro M., Coumoul, Xavier, Patterson, Andrew D., 2023

Aryl hydrocarbon receptor activation affects nitrergic neuronal survival and delays intestinal motility in mice
Toxicological Sciences, Vijay, A, Boyle, N, Kumar, S, Perdew, Gary H., Srinivasan, S, Patterson, Andrew, 2023

Postpartum intrauterine dextrose infusion: Effects on uterine health, metabolic stress, systemic inflammation, and daily milk yield in clinically healthy dairy cows
JDS Communications, Mattice, H., Jimenez, E., Hovingh, E., Bas, S., Martinez, M., Barragan, A. A., 2023

Metabolic Profiling in Ruminant Diagnostics
Veterinary Clinics of North America - Food Animal Practice, Van Saun, Robert J., 2023

A systematic review to describe patterns of animal and human viral research in Rwanda
International Health, Dutuze, M. Fausta, Byukusenge, Maurice, Shyaka, Anselme, Christofferson, Rebecca C., 2023

Aryl Hydrocarbon Receptor Activation Coordinates Mouse Small Intestinal Epithelial Cell Programming
Laboratory Investigation, Zhou, Xiaoliang, Chakraborty, Debopriya, Murray, Iain A., Coslo, Denise, Kehs, Zoe, Vijay, Anitha, Ton, Carolyn, Desai, Dhimant, Amin, Shantu G., Patterson, Andrew D., Perdew, Gary H., 2023

Lead optimization of aryl hydrocarbon receptor ligands for treatment of inflammatory skin disorders
Biochemical Pharmacology, Rikken, Gijs, Smith, Kayla J., van den Brink, Noa J.M., Smits, Jos P.H., Gowda, Krishne, Alnemri, Angela, Kuzu, Gulsum E., Murray, Iain Alexander, Lin, Jyh ming, Smits, Jos G.A., van Vlijmen-Willems, Ivonne M., Amin, Shantu G., Perdew, Gary H., van den Bogaard, Ellen H., 2023

Growth Hormone Alters Circulating Levels of Glycine and Hydroxyproline in Mice
Metabolites, Young, Jonathan A., Duran-Ortiz, Silvana, Bell, Stephen, Funk, Kevin, Tian, Yuan, Liu, Qing, Patterson, Andrew D., List, Edward O., Berryman, Darlene E., Kopchick, John J., 2023

Virology under the Microscope—a Call for Rational Discourse
Journal of Virology, Goodrum, F, Lowen, A, Lakdawala, S, Alwine, J, Casadevall, A, Imperiale, M, Atwood, W, Avgousti, D, Baines, J, Banfield, B, Banks, L, Bhaduri-McIntosh, S, Bhattacharya, D, Blanco-Melo, D, Bloom, D, Boon, A, Boulant, S, Brandt, C, Broadbent, A, Brooke, C, Cameron, C, Campos, S, Caposio, P, Chan, G, Cliffe, A, Coffin, J, Collins, K, Damania, B, Daugherty, M, Debbink, K, DeCaprio, J, Dermody, T, Dikeakos, J, DiMaio, D, Dinglasan, R, Duprex, W, Dutch, R, Elde, N, Emerman, M, Enquist, L, Fane, B, Fernandez-Sesma, A, Flenniken, M, Frappier, L, Frieman, M, Frueh, K, Gack, M, Gaglia, M, Gallagher, T, Galloway, D, García-Sastre, A, Geballe, A, Glaunsinger, B, Goff, S, Greninger, A, Hancock, M, Harris, E, Heaton, N, Heise, M, Heldwein, E, Hogue, B, Horner, S, Hutchinson, E, Hyser, J, Jackson, W, Kalejta, R, Kamil, J, Karst, S, Kirchhoff, F, Knipe, D, Kowalik, T, Lagunoff, M, Laimins, L, Langlois, R, Lauring, A, Lee, B, Leib, D, Liu, S, Longnecker, R, Lopez, C, Luftig, M, Lund, J, Manicassamy, B, McFadden, G, McIntosh, M, Mehle, A, Miller, W, Mohr, I, Moody, C, Moorman, N, Moscona, A, Mounce, B, Munger, J, Münger, K, Murphy, E, Naghavi, M, Nelson, J, Neufeldt, C, Nikolich, J, O'Connor, C, Ono, A, Orenstein, W, Ornelles, D, Ou, J, Parker, J, Parrish, C, Pekosz, A, Pellett, P, Pfeiffer, J, Plemper, R, Polyak, S, Purdy, J, Pyeon, D, Quinones-Mateu, M, Renne, R, Rice, C, Schoggins, J, Roller, R, Russell, C, Sandri-Goldin, R, Sapp, M, Schang, L, Schmid, S, Schultz-Cherry, S, Semler, B, Shenk, T, Silvestri, G, Simon, V, Smith, G, Smith, J, Spindler, K, Stanifer, M, Subbarao, K, Sundquist, W, Suthar, M, Sutton, Troy, Tai, A, Tarakanova, V, tenOever, B, Tibbetts, S, Tompkins, S, Toth, Z, van Doorslaer, K, Vignuzzi, M, Wallace, N, Walsh, D, Weekes, M, Weinberg, J, Weitzman, M, Weller, S, Whelan, S, White, E, Williams, B, Wobus, C, Wong, S, Yurochko, A, 2023

Virology under the Microscope—a Call for Rational Discourse
mSphere, Goodrum, F, Lowen, A, Lakdawala, S, Alwine, J, Casadevall, A, Imperiale, M, Atwood, W, Avgousti, D, Baines, J, Banfield, B, Banks, L, Bhaduri-McIntosh, S, Bhattacharya, D, Blanco-Melo, D, Bloom, D, Boon, A, Boulant, S, Brandt, C, Broadbent, A, Brooke, C, Cameron, C, Campos, S, Caposio, P, Chan, G, Cliffe, A, Coffin, J, Collins, K, Damania, B, Daugherty, M, Debbink, K, DeCaprio, J, Dermody, T, Dikeakos, J, DiMaio, D, Dinglasan, R, Duprex, W, Dutch, R, Elde, N, Emerman, M, Enquist, L, Fane, B, Fernandez-Sesma, A, Flenniken, M, Frappier, L, Frieman, M, Frueh, K, Gack, M, Gaglia, M, Gallagher, T, Galloway, D, García-Sastre, A, Geballe, A, Glaunsinger, B, Goff, S, Greninger, A, Hancock, M, Harris, E, Heaton, N, Heise, M, Heldwein, E, Hogue, B, Horner, S, Hutchinson, E, Hyser, J, Jackson, W, Kalejta, R, Kamil, J, Karst, S, Kirchhoff, F, Knipe, D, Kowalik, T, Lagunoff, M, Laimins, L, Langlois, R, Lauring, A, Lee, B, Leib, D, Liu, S, Longnecker, R, Lopez, C, Luftig, M, Lund, J, Manicassamy, B, McFadden, G, McIntosh, M, Mehle, A, Miller, W, Mohr, I, Moody, C, Moorman, N, Moscona, A, Mounce, B, Munger, J, Münger, K, Murphy, E, Naghavi, M, Nelson, J, Neufeldt, C, Nikolich, J, O'Connor, C, Ono, A, Orenstein, W, Ornelles, D, Ou, J, Parker, J, Parrish, C, Pekosz, A, Pellett, P, Pfeiffer, J, Plemper, R, Polyak, S, Purdy, J, Pyeon, D, Quinones-Mateu, M, Renne, R, Rice, C, Schoggins, J, Roller, R, Russell, C, Sandri-Goldin, R, Sapp, M, Schang, L, Schmid, S, Schultz-Cherry, S, Semler, B, Shenk, T, Silvestri, G, Simon, V, Smith, G, Smith, J, Spindler, K, Stanifer, M, Subbarao, K, Sundquist, W, Suthar, M, Sutton, Troy, Tai, A, Tarakanova, V, tenOever, B, Tibbetts, S, Tompkins, S, Toth, Z, van Doorslaer, K, Vignuzzi, M, Wallace, N, Walsh, D, Weekes, M, Weinberg, J, Weitzman, M, Weller, S, Whelan, S, White, E, Williams, B, Wobus, C, Wong, S, Yurochko, A, 2023

Metabolic regulation of stress erythropoiesis, outstanding questions, and possible paradigms
Frontiers in Physiology, Ruan, Baiye, Paulson, Robert F., 2023

Vitamin D, microbiota, and inflammatory bowel disease, Cantorna, Margherita T., Arora, Juhi, 2023

Biology of Stress Responses in Aging.
Aging Biology, Maragkakis, M, Malla, S, Hatzoglou, M, Trifunovic, A, Glick, Adam, Finkel, T, Longo, V, Kaushik, S, Muñoz-Cánoves, P, Lithgow, G, Naidoo, N, Booth, L, Payea, M, Herman, A, de Cabo, R, Wilson, D, Ferrucci, L, Gorospe, M, 2023

Intra-Peritoneal Transplantation for Generating Acute Myeloid Leukemia in Mice
Journal of Visualized Experiments, Qian, Fenghua, Arner, Brooke E., Nettleford, Shaneice K., Paulson, Robert F., Prabhu, K. Sandeep, 2023

Contribution of Circulating Host and Microbial Tryptophan Metabolites Toward Ah Receptor Activation
International Journal of Tryptophan Research, Morgan, Ethan W., Dong, Fangcong, Annalora, Andrew J., Murray, Iain A., Wolfe, Trenton, Erickson, Reece, Gowda, Krishne, Amin, Shantu G., Petersen, Kristina S., Kris-Etherton, Penny M., Marcus, Craig B., Walk, Seth T., Patterson, Andrew D., Perdew, Gary H., 2023

Endogenous Tryptophan-Derived Ah Receptor Ligands are Dissociated from CYP1A1/1B1-Dependent Negative-Feedback
International Journal of Tryptophan Research, Dong, Fangcong, Annalora, Andrew J., Murray, Iain A., Tian, Yuan, Marcus, Craig B., Patterson, Andrew D., Perdew, Gary H., 2023

Alpha-tocopherylquinone-mediated activation of the Aryl Hydrocarbon Receptor regulates the production of inflammation-inducing cytokines and ameliorates intestinal inflammation
Mucosal Immunology, Saha, Kushal, Subramenium Ganapathy, Ashwinkumar, Wang, Alexandra, Arumugam, Priya, Michael Morris, Nathan, Harris, Leonard, Yochum, Gregory, Koltun, Walter, Perdew, Gary H., Nighot, Meghali, Ma, Thomas, Nighot, Prashant, 2023

2021-2022 Toxicological Sciences paper of the year
Toxicological Sciences, Guo, Lei, Peters, Jeffrey, 2023

Loss of selenoprotein W in murine macrophages alters the hierarchy of selenoprotein expression, redox tone, and mitochondrial functions during inflammation
Redox Biology, Misra, Sougat, Lee, Tai-Jung, Hall, Molly, Sebastian, Aswathy, McGuigan, John, Liao, Chang, Koo, Imhoi, Patterson, A, Rossi, Randall, Hall, Molly, Albert, Istvan, others, None, Prabhu, K, 2023

Strain-Level Identification and Analysis of Avian Coronavirus Using Raman Spectroscopy and Interpretable Machine Learning, Jin, Peng, Yeh, Yin Ting, Ye, Jiarong, Wang, Ziyang, Xue, Yuan, Zhang, Na, Huang, Shengxi, Ghedin, Elodie, Lu, Huaguang, Schmitt, A, Schmitt, Anthony, Lu, H, Huang, Sharon, Terrones Maldonado, M, Terrones, Mauricio, 2023

Preclinical Demonstration of a Novel Treatment with High Efficacy and No Detectable Toxicity for Inflammatory Skin Conditions including Psoriasis
BioMed Research International, Vanden Heuvel, John P., Zhou, Shuling, Patel, Anisha B., Kamerow, Harry N., Baran, Peter, Ford, John P., 2023

Refined fiber inulin promotes inflammation-associated colon tumorigenesis by modulating microbial succinate production
Cancer Reports, Tian, Sangshan, Paudel, Devendra, Hao, Fuhua, Neupane, Rabin, Castro, Rita, Patterson, Andrew D., Tiwari, Amit K., Prabhu, K. Sandeep, Singh, Vishal, 2023

Urine-based Detection of Congenital Portosystemic Shunt in C57BL/6 Mice
Function, Yeoh, Beng San, Golonka, Rachel M., Saha, Piu, Kandalgaonkar, Mrunmayee R., Tian, Yuan, Osman, Islam, Patterson, Andrew D., Gewirtz, Andrew T., Joe, Bina, Vijay-Kumar, Matam, 2023

Comparative urine metabolomics of mice treated with non-toxic and toxic oral doses of (−)-epigallocatechin-3-gallate
Food and Function, Hwang, Soomee, Koo, Imhoi, Patterson, Andrew D., Lambert, Joshua D., 2023

Psyllium Fiber Protects Against Colitis Via Activation of Bile Acid Sensor Farnesoid X Receptor
Cellular and Molecular Gastroenterology and Hepatology, Bretin, A, Zou, J, San Yeoh, B, Ngo, V, Winer, S, Winer, D, Reddivari, L, Pellizzon, M, Walters, W, Patterson, Andrew, Ley, R, Chassaing, B, Kumar, Matam Vijay, Vijay-Kumar, M, Gewirtz, A, 2023

Changes in fecal lipidome after treatment with ivacaftor without changes in microbiome or bile acids
Journal of Cystic Fibrosis, Bass, Rosara, Tanes, Ceylan, Bittinger, Kyle, Li, Yun, Lee, Hongzhe, Friedman, Elliot S．, Koo, Imhoi, Patterson, Andrew David, Liu, Qing, Wu, Gary D．, Stallings, Virginia A．, 2023

Thank you: 2022 JAVMA Reviewers
Journal of the American Veterinary Medical Association, Aarnes, Turi, Abeysekara, Saman, Acierno, Michelle, Adams, Chess, Adin, Darcy, Alcaraz, Ana, Alvarez, Leilani, An, Sea, Anderson, David, Angliss, Gillian, Arbe Montoya, Alejandra, Artemiou, Elpida, Auckburally, Adam, Auger, Mylene, Ayalew, Lisanework E., Azuma, Chieko, Backus, Robert, Baetge, Courtney, Bain, Bridgette, Balmer, Bethany, Beaver, Bonnie, Beccati, Francesca, Beck, Sam, Benedicenti, Leontine, Bentley, Ellison, Berger, Jeannine, Bertone, Joseph, Bertoni, Lelia, Betbeze, Caroline, Bienzle, Dorothee, Birks, Eric, Bjork, Kathe, Black, Kelly, Blanchard, Patricia, Blikslager, Anthony, Boag, Alisdair, Bolfa, Pompei, Boorman, Sophie, Borkowski, Emma, Boudreau, Beth, Bouillon, Juliette, Bove, Christina, Boynton, Elizabeth, Bradley, Michael, Braga, Ísis Assis, Brandt, Jennifer, Brannick, Erin, Branquart, Marie, Brenseke, Bonnie, Brosnan, Robert, Brown, Catherine, Brunetto, Marcio, Brunke, Matthew, Brust, Kelsey, Bruyette, David, Budsberg, Steven, Burba, Daniel, Burke, Kathrin, Burns, Patrick, Burns, Teresa, Burrough, Eric, Butkiewicz, Christine, Cain, Christine, Calder, Christine, Carniel, Felipe, Carrera-Justiz, Sheila C., Cavasin, João, Celeste, Christophe, Choi, Eunju, Chow, Rosalind, Christensen, Bruce, Christmann, Undine, Churchill, Julie, Ciccarelli, Michela, Cioffi, Krista, Clark, Laura, Clark, Terrence, Clarke, Lorelei, Cline, Martha, Coe, Jason, Cooley, Stacy, Corps, Kara, Côté, Etienne, Coudry, Virginie, Crabtree, Amanda, Cray, Megan, Cremer, Jeannette, da Costa, Judith, Datz, Craig, Davidson, Autumn, Davies, Sarah, Demianiuk, Ryan, Dempsey, Lara, Desai, Noopur, di Virgilio, Fabrizio, Dobson, Howard, Donnelly, Amanda, Dörfelt, René, Dos Santos, Luis, Duncan, Colleen, Durham, Amy, Durham, Andy, Dvorak, Glenda, Dyke, Timothy, Eckstrand, Chrissy, Edmondson, Elijah, Ernst, Marigold, Evason, Michelle, Fajt, Virginia, Farrelly, John, Fenton, Heather, Fonken, Laurie, Ford, Richard, Fortier, Lisa, Foster, Derek, Foster, J. D., Fraile, Lorenzo, Freeman, David, Fry, Lindsay, Frykfors von Hekkel, Anna, Fults, Mandy, Furr, Martin, Gades, Naomi, Galban, Evelyn, Garrett, Laura, Gendron, Karine P., Gerken, Kathy, Giger, Urs, Gilbert, Gregory, Gilmour, Lindsey, Ginja, Mário, Goff, Jesse, Golab, Gail, Golini, Lorenzo, Gonçalves Arruda, Andréia, Grady, Jesse, Graham, Thomas, Grant, David, Grasso, Stefania, Graves, Meggan, Greenacre, Cheryl, Griffenhagen, Greg, Griffett, Kristine, Groover, Erin, Grubb, Tamara, Guedes, Alonso, Guzu, Michel, Hackett, Eileen, Halleran, Jennifer, Halpern, Nancy, Hammond, Tara, Hanzlicek, Andrew, Harbison, Carole, Harper, Susan, Hatt, Jean Michel, Hawkins, Jan, Hayes, Galina, Helgert, Nathan, Henderson, Kristi, Hepburn, Richard, Hess, Tanja, Hildreth, Blake, Hill, Jacqueline, Hinds, C. Austin, Hitchener, Gavin, Hofmeister, Erik, Holmes, Mary, Holyoak, G., Hornof, William, Hostetter, Shannon, Hostnik, Eric, Hsue, Weihow, Huynh, Elizabeth, Ienello, Lauren, Innis, Charles, Intile, Joanne, Jaffe, Michael, Jamieson, Pauline, Jelinski, Murray, Jennings, Michael, Jennings, Ryan, Jensen, Monica, Jesudoss Chelladurai, Jeba, Jinks, Maggie, Johnson-Delaney, Cathy, Johnson, Cheri, Kaneps, Andris, Kass, Philip, Katz, Terry, Kedrowicz, April, Keesler, Rebekah, Kent, Michael S., Kjemtrup, Anne, Kline, Karen, Kogan, Lori, Kopecny, Lucy, Kopper, Jamie, Koziol, Jennifer, Krebs, Kaitlyn, Krecic, Matthew, Krick, Erika, Kruckman-Gatesy, Carolynne, Kruse-Elliott, Kris, Kuhn, Matthew, KuKanich, Kate, Laborda, Alicia, Lakritz, Jeffrey, Lam, Kenneth, Langlois, Daniel, LaRue, Michelle, Le Boedec, Kevin, Lejeune, Amandine, Lejeune, Manigandan, Lennox, Angela, Les, Clifford, Lester, Sally, Leveille-Webster, Cynthia, Levin, Michael, Lewbart, Gregory, Lewin, Andrew, Lewis, Elisa, Linder, Deborah, Lo Feudo, Chiara, Loehr, Christiane, Loftus, John, Lommer, Milinda, Lozier, Joseph, Lund, Elizabeth, Lyman, Candace, Maliye, Sylvia, Manfra Marretta, Sandra, Manso-Díaz, Gabriel, Marsella, Rosanna, Martin-Flores, Manuel, Masciarelli, Amanda, Matheson, Jodi, Mathews, Kyle, Matushek, Kurt, Mayhew, Phillip, McClure, Scott, McConkey, Sandra, McGhie, Jayne, McNabb, Bret, Megahed, Ameer, Meyer, James, Meyer, Robert, Miles, Kristina, Miller, Paul, Miranda, Ileana, Moisan, Peter, Momont, Harry, Monki, Jenni, Moore, George, Moore, Irene, Morello, Samantha, Morishita, Teresa, Morrison, Philippa K., Mrdutt, Katie, Muldoon, Emily, Munoz Juzado, Ana, Murtaugh, Robert, Nash, Katherine, Needle, David, Neill, Clinton, Nemanic, Sarah, Newman, Ashleigh, Novakovic, Predrag, Nowland, Megan, O’Brien, Liam, Ober, Christopher, Ojha, Shivani, Olds, June, Ollivett, Theresa, Osborn, Michelle, Palerme, J. S., Papich, Mark, Pardo, Anthony, Partnow, Alix, Pascoe, Peter, Pauwels, Frederik, Pedersen, Karl, Pellin, MacKenzie, Penix, Elizabeth, Peralta, Santiago, Perry, Amie, Pierce, Kursten, Pinard, Chantale, Pinn, Toby, Pintar, Jason, Plattner, Brandon, Porat-Mosenco, Yael, Pownder, Sarah, Pressler, Barrak, Pritt, Stacy, Pugh, David, Pumipuntu, Natapol, Pumphrey, Stephanie, Pypendop, Bruno, Quandt, Jane, Raghavan, Malathi, Ramos, Dirceu, Ramsay, Edward, Rancilio, Nicholas, Rankin, Amy, Reed, Willie, Rhodes, Linda, Rhodin, Marie, Rishniw, Mark, Robertson, Sheilah, Rossi, Amy, Ruby, Rebecca, Ruetten, Hannah, Rutherford, Lynda, Rylander, Helena, Rzechorzek, Nina, Sadar, Miranda, Santajit, Sirijan, Scharf, Valery, Schermerhorn, Thomas, Schmiedt, Chad, Sebbag, Lionel, Selmic, Laura, Shaikh, Layla, Shaw, Gillian, Shaw, Jane, Singh, Ameet, Sinnott-Stutzman, Virginia, Sitthicharoenchai, Panchan, Sivén, Mia, Slater, Margaret, Slenning, Barrett, Smith, Carin, Southard, Teresa, Spitznagel, Mary, Stelow, Elizabeth, Steneroden, Katie, Stranahan, Lauren, Strickland, Rhiannon, Sykes, Jane, Tabaran, Flaviu, Tackett, Randall, Teller, Lori, Tessier, Gussie, Tetens-Woodring, Joanne, Theurer, Miles, Tinga, Selena, Tolbert, M. Katherine, Townsend, Neil, Trehy, Mary, Trim, Cynthia, Tsai, Steven, Urfer, Silvan, Vallone, Lucien, Van Saun, Robert, Verteramo Chiu, Leslie, Vieira, Aline, Villarroel, Aurora, Volk, John, Wagner, Robert, Wallace, Ryan, Walsh, Audra, Walters, Brian, Wara, Allison, Waselau, Martin, Watkins, Amanda, Webb, Craig, Weese, J. Scott, Weil, Ann, White, Nathaniel, Whitlock, Brian, Wiedmeyer, Charles, Wilkinson, Ashley, Wilkołek, Piotr, Willard, Michael, Withers, Sita, Wood, Jonathan, Woolcock, Andrew, Worley, Deanna, Wosar, Marc, Wright, Ian, Wu, Timothy, Wustefeld-Janssens, Brandan, Yoo, Dongwan, Yoon, Junghee, Zachariah, Trevor, Zalcman, Amy, Zellner, Eric, Zersen, Kristin, 2023

DNA immunization with in silico predicted T-cell epitopes protects against lethal SARS-CoV-2 infection in K18-hACE2 mice
Frontiers in Immunology, Persson, Gry, Restori, Katherine H., Emdrup, Julie Hincheli, Schussek, Sophie, Klausen, Michael Schantz, Nicol, McKayla J., Katkere, Bhuvana, Rønø, Birgitte, Kirimanjeswara, Girish, Sørensen, Anders Bundgaard, 2023

Virology under the Microscope-a Call for Rational Discourse
mBio, Goodrum, F, Lowen, A, Lakdawala, S, Alwine, J, Casadevall, A, Imperiale, M, Atwood, W, Avgousti, D, Baines, J, Banfield, B, Banks, L, Bhaduri-McIntosh, S, Bhattacharya, D, Blanco-Melo, D, Bloom, D, Boon, A, Boulant, S, Brandt, C, Broadbent, A, Brooke, C, Cameron, C, Campos, S, Caposio, P, Chan, G, Cliffe, A, Coffin, J, Collins, K, Damania, B, Daugherty, M, Debbink, K, DeCaprio, J, Dermody, T, Dikeakos, J, DiMaio, D, Dinglasan, R, Duprex, W, Dutch, R, Elde, N, Emerman, M, Enquist, L, Fane, B, Fernandez-Sesma, A, Flenniken, M, Frappier, L, Frieman, M, Frueh, K, Gack, M, Gaglia, M, Gallagher, T, Galloway, D, García-Sastre, A, Geballe, A, Glaunsinger, B, Goff, S, Greninger, A, Hancock, M, Harris, E, Heaton, N, Heise, M, Heldwein, E, Hogue, B, Horner, S, Hutchinson, E, Hyser, J, Jackson, W, Kalejta, R, Kamil, J, Karst, S, Kirchhoff, F, Knipe, D, Kowalik, T, Lagunoff, M, Laimins, L, Langlois, R, Lauring, A, Lee, B, Leib, D, Liu, S, Longnecker, R, Lopez, C, Luftig, M, Lund, J, Manicassamy, B, McFadden, G, McIntosh, M, Mehle, A, Miller, W, Mohr, I, Moody, C, Moorman, N, Moscona, A, Mounce, B, Munger, J, Münger, K, Murphy, E, Naghavi, M, Nelson, J, Neufeldt, C, Nikolich, J, O'Connor, C, Ono, A, Orenstein, W, Ornelles, D, Ou, J, Parker, J, Parrish, C, Pekosz, A, Pellett, P, Pfeiffer, J, Plemper, R, Polyak, S, Purdy, J, Pyeon, D, Quinones-Mateu, M, Renne, R, Rice, C, Schoggins, J, Roller, R, Russell, C, Sandri-Goldin, R, Sapp, M, Schang, L, Schmid, S, Schultz-Cherry, S, Semler, B, Shenk, T, Silvestri, G, Simon, V, Smith, G, Smith, J, Spindler, K, Stanifer, M, Subbarao, K, Sundquist, W, Suthar, M, Sutton, Troy, Tai, A, Tarakanova, V, tenOever, B, Tibbetts, S, Tompkins, S, Toth, Z, van Doorslaer, K, Vignuzzi, M, Wallace, N, Walsh, D, Weekes, M, Weinberg, J, Weitzman, M, Weller, S, Whelan, S, White, E, Williams, B, Wobus, C, Wong, S, Yurochko, A, 2023

Antimicrobial Resistance Profiling of Escherichia coli Isolated from Chickens in Northern Province of Rwanda
African Journal of Biomedical Research, Cyuzuzo, E., Amosun, E. A., Byukusenge, M., Musanayire, V., 2023

A microbiome-dependent gut–brain pathway regulates motivation for exercise
Nature, Dohnalová, Lenka, Lundgren, Patrick, Carty, Jamie R.E., Goldstein, Nitsan, Wenski, Sebastian L., Nanudorn, Pakjira, Thiengmag, Sirinthra, Huang, Kuei Pin, Litichevskiy, Lev, Descamps, Hélène C., Chellappa, Karthikeyani, Glassman, Ana, Kessler, Susanne, Kim, Jihee, Cox, Timothy O., Dmitrieva-Posocco, Oxana, Wong, Andrea C., Allman, Erik L., Ghosh, Soumita, Sharma, Nitika, Sengupta, Kasturi, Cornes, Belinda, Dean, Nitai, Churchill, Gary A., Khurana, Tejvir S., Sellmyer, Mark A., FitzGerald, Garret A., Patterson, Andrew D., Baur, Joseph A., Alhadeff, Amber L., Helfrich, Eric J.N., Levy, Maayan, Betley, J. Nicholas, Thaiss, Christoph A., 2022

The role of selenoproteins in neutrophils during inflammation
Archives of Biochemistry and Biophysics, Lee, Tai Jung, Nettleford, Shaneice K., McGlynn, Allison, Carlson, Bradley A., Kirimanjeswara, Girish S., Prabhu, K. Sandeep, 2022

Genetic differences in nicotine sensitivity and metabolism in C57BL/6J and NOD/ShiLtJ mouse strains
Neuropharmacology, Seemiller, L, Goldberg, L, Smith, P, Dennis, J, Patterson, A, Gould, Thomas J., 2022

The unfolded protein response gene Ire1α is required for tissue renewal and normal differentiation in the mouse tongue and esophagus
Developmental Biology, Chalmers, F, Mogre, S, Rimal, B, Son, J, Patterson, Andrew D., Stairs, Douglas B., Glick, Adam, 2022

Correlation of Serum Selenium in Asthma Patients with Severity of the Disorder
Biological Trace Element Research, Girdhar, Nidhi, Kansal, Heena, Garg, Kranti, Sharma, Siddharth, Prabhu, K. Sandeep, Chopra, Vishal, Tinkov, Alexey A., Skalny, Anatoly V., Prakash, N. Tejo, 2022

Defective humoral immunity disrupts bile acid homeostasis which promotes inflammatory disease of the small bowel
Nature Communications, Mohammed, Ahmed Dawood, Mohammed, Zahraa, Roland, Mary M., Chatzistamou, Ioulia, Jolly, Amy, Schoettmer, Lillian M., Arroyo, Mireya, Kakar, Khadija, Tian, Yuan, Patterson, Andrew, Nagarkatti, Mitzi, Nagarkatti, Prakash, Kubinak, Jason L., 2022

Glycine-β-muricholic acid antagonizes the intestinal farnesoid X receptor–ceramide axis and ameliorates NASH in mice
Hepatology Communications, Jiang, Jie, Ma, Yuandi, Liu, Yameng, Lu, Dasheng, Gao, Xiaoxia, Krausz, Kristopher W., Desai, Dhimant, Amin, Shantu G., Patterson, Andrew D., Gonzalez, Frank J., Xie, Cen, 2022

Sequential Transmission of Influenza Viruses in Ferrets Does Not Enhance Infectivity and Does Not Predict Transmissibility in Humans
mBio, Sutton, Troy C., Lamirande, Elaine W., Patel, Devanshi R., Johnson, Katherine E.E., Czako, Rita, Ghedin, Elodie, Lee, Raphael T.C., Maurer-Stroh, Sebastian, Subbarao, Kanta, 2022

Secondary Terpenes in Cannabis sativa L.: Synthesis and Synergy
Biomedicines, Chacon, Francisco, Raup-Konsavage, Wesley M., Vrana, Kent E., Kellogg, Joshua, 2022

Cannabidiolic acid activates the expression of the PPARβ/δ target genes in MDA-MB-231 cells
Archives of Biochemistry and Biophysics, Hirao-Suzuki, Masayo, Takayuki, Koga, Takiguchi, Masufumi, Peters, Jeffrey M., Takeda, Shuso, 2022

Evaluating the effects of a prepartum oral treatment with acetylsalicylic acid on postpartum cow health and milk yield in Holstein dairy cows
2022 ARPAS, Jimenez, Esteban, Barragan, Adrian, 2022

Interaction of sodium acetate supplementation and dietary fiber level on feeding behavior, digestibility, milk synthesis, and plasma metabolites
Journal of Dairy Science, Matamoros, C, Hao, F, Tian, Y., Patterson, A. D., Harvatine, K. J., 2022

Transmission of Human Influenza A Virus in Pigs Selects for Adaptive Mutations on the HA Gene
Journal of Virology, Mo, Jong Suk, Abente, Eugenio J., Perez, Matias Cardenas, Sutton, Troy C., Cowan, Brianna, Ferreri, Lucas M., Geiger, Ginger, Gauger, Phillip C., Perez, Daniel R., Vincent Baker, Amy L., Rajao, Daniela S., 2022

Blackhead
NAGA News, Lighty, Megan, 2022

AHR is a master regulator of diverse pathways in endogenous metabolism
Scientific Reports, Granados, J, Falah, K, Koo, Imhoi, Morgan, E, Perdew, Gary H., Patterson, A, Jamshidi, N, Nigam, S, 2022

TGFβ1 regulates HRas-mediated activation of IRE1α through the PERK-RPAP2 axis in keratinocytes
Molecular Carcinogenesis, Mogre, Saie, Blazanin, Nicholas, Walsh, Hailey, Ibinson, Jack, Minnich, Chase, Andrew Hu, Chih Chi, Glick, Adam B., 2022

Bile acid conjugation deficiency causes hypercholanemia, hyperphagia, islet dysfunction, and gut dysbiosis in mice
Hepatology Communications, Alrehaili, Bandar D., Lee, Mikang, Takahashi, Shogo, Novak, Robert, Rimal, Bipin, Boehme, Shannon, Trammell, Samuel A.J., Grevengoed, Trisha J., Kumar, Devendra, Alnouti, Yazen, Chiti, Katya, Wang, Xinwen, Patterson, Andrew D., Chiang, John Y.L., Gonzalez, Frank J., Lee, Yoon Kwang, 2022

Early Life Polychlorinated Biphenyl 126 Exposure Disrupts Gut Microbiota and Metabolic Homeostasis in Mice Fed with High-Fat Diet in Adulthood
Metabolites, Tian, Yuan, Rimal, Bipin, Gui, Wei, Koo, Imhoi, Smith, Philip B., Yokoyama, Shigetoshi, Patterson, Andrew D., 2022

Comparison of Pathology and Immunohistochemistry in Natural and Experimental West Nile Virus Infections in Ruffed Grouse (Bonasa umbellus)
Journal of Wildlife Diseases, Kunkel, Melanie R., Brown, Justin D., Williams, Lisa, Niedringhaus, Kevin D., Fenton, Heather, Ruder, Mark G., Nemeth, Nicole M., 2022

Refining the definition of the avian pathogenic Escherichia coli (APEC) pathotype through inclusion of high-risk clonal groups
Poultry Science, Johnson, Timothy J., Miller, Elizabeth A., Flores-Figueroa, Cristian, Munoz-Aguayo, Jeannette, Cardona, Carol, Fransen, Katie, Lighty, Megan, Gonder, Eric, Nezworski, Jill, Haag, Adam, Behl, Michelle, Kromm, Michelle, Wileman, Ben, Studniski, Marissa, Singer, Randall S., 2022

Vitamin D for COVID-19: where are we now?
Nature Reviews Immunology, Martineau, Adrian R., Cantorna, Margherita T., 2022

Effect of 2-hydroxy-4-(methylthio)butanoate (HMTBa) on milk fat, rumen environment and biohydrogenation, and rumen protozoa in lactating cows fed diets with increased risk for milk fat depression
Journal of Dairy Science, Baldin, M, Garcia, D, Zanton, G, Hao, F, Patterson, A. D., Harvatine, Kevin, 2022

Bile acid metabolism and signaling, the microbiota, and metabolic disease
Pharmacology and Therapeutics, Part A: Chemotherapy, Toxicology and, Cai, Jingwei, Rimal, Bipin, Jiang, Changtao, Chiang, John Y.L., Patterson, Andrew D., 2022

Changes in the Hemagglutinin and Internal Gene Segments Were Needed for Human Seasonal H3 Influenza A Virus to Efficiently Infect and Replicate in Swine
Pathogens, Rajao, Daniela S., Abente, Eugenio J., Powell, Joshua D., Bolton, Marcus J., Gauger, Phillip C., Arruda, Bailey, Anderson, Tavis K., Sutton, Troy C., Perez, Daniel R., Vincent Baker, Amy L., 2022

Defining the relationship between inoculation dose and transmission for the 2009 H1N1 and 1968 H3N2 pandemic influenza viruses, Septer, Kayla, Field, Cassandra, Patel, Devanshi, Sim, D, Sutton, Troy, 2022

Immune durability and protection against SARS-CoV-2 re-infection in Syrian hamsters., Field, Cassandra, Heinly, Talia, Patel, Devanshi, Sim, D, Luley, Erin, Gupta, S, Vanderford, Thomas, Wrammert, Jens, Sutton, Troy, 2022

The role of vaccine-induced intranasal immunity on transmission of pandemic H1N1 in the ferret model., Septer, Kayla, Sim, D, Patel, Devanshi, Field, Cassandra, Heinly, Talia, Norton, Elizabeth, Sutton, Troy, 2022

Delivery of Therapeutic miR-148b Mimic via Poly(β Amino Ester) Polyplexes for Post-transcriptional Gene Regulation and Apoptosis of A549 Cells
Langmuir, Alden, N, Arrizabalaga, J, Liu, Y, Amin, Shantu, Gowda, Krishne, Yao, S, Archetti, Marco, Glick, Adam, Hayes, Daniel J., 2022

Aerosolized Hydrogen Peroxide Decontamination of N95 Respirators, with Fit-Testing and Viral Inactivation, Demonstrates Feasibility for Reuse during the COVID-19 Pandemic
mSphere, Derr, Thomas, James, Melissa, Kuny, Chad, Patel, Devanshi, Kendell, Prem, Kandel, Prem, Field, Cassandra, Beckman, Matthew, Hockett, Kevin L., Bates, Mark, Sutton, Troy, Szpara, Moriah L., 2022

Robustness of the Ferret Model for Influenza Risk Assessment Studies: a Cross-Laboratory Exercise
mBio, Belser, Jessica A., Lau, Eric H.Y., Barclay, Wendy, Barr, Ian G., Chen, Hualan, Fouchier, Ron A.M., Hatta, Masato, Herfst, Sander, Kawaoka, Yoshihiro, Lakdawala, Seema S., Yi Yang Lee, Leo, Neumann, Gabriele, Peiris, Malik, Perez, Daniel R., Russell, Charles, Subbarao, Kanta, Sutton, Troy C., Webby, Richard J., Yang, Huanliang, Yen, Hui Ling, 2022

Young researchers series #4
Trends in Cell Biology, Smith, Keisha, Green, Mykel D., Wacleche, Vanessa Sue, 2022

Early Life Short-Term Exposure to Polychlorinated Biphenyl 126 in Mice Leads to Metabolic Dysfunction and Microbiota Changes in Adulthood
International Journal of Molecular Sciences, Tian, Yuan, Rimal, B, Gui, W, Koo, Imhoi, Yokoyama, Shigetoshi, Perdew, Gary H., Patterson, A, 2022

Immune durability and protection against SARS-CoV-2 re-infection in Syrian hamsters., Field, Cassandra, Heinly, Talia, Patel, Devanshi, Sim, D, Luley, Erin, Gupta, S, Vanderford, Thomas, Wrammert, Jens, Sutton, Troy, 2022

Intranasal vaccination with hemagglutinin or neuraminidase reduces airborne transmission of pandemic H1N1 in ferrets, Septer, Kayla, Sim, D, Patel, Devanshi, Field, Cassandra, Heinly, Talia, Sutton, Troy, 2022

Introducing riskCommunicator: An R package to obtain interpretable effect estimates for public health
PLoS One, Grembi, Jessica, Rogawski McQuade, E, 2022

Assessment of human resources practices for English speaking and Spanish-speaking personnel in dairy farms in Pennsylvania.
2022 ADSA Annual Meeting, Martinez, Marcela, Barragan, Adrian, 2022

Assessment of the associations between haptoglobin concentration during the late dry period and calving-related events in dairy cattle
2022 ADSA Annual Meeting, Shabloski, Mikel, Barragan, Adrian, 2022

Assessment of the effects of prepartum anti-inflammatory therapies on body condition score, daily milk yield, and daily rumination time in Holstein dairy cows
2022 ADSA Annual Meeting, Spring, Jacqueline, Barragan, Adrian, 2022

Assessment of the effects of prepartum anti-inflammatory therapies on cow health and reproductive performance in Holstein dairy cows
2022 ADSA Annual Meeting, Jimenez, Esteban, Barragan, Adrian, 2022

Associations between clinical metritis and type 1/type 2 immunity in postpartum Holstein dairy cows
2022 ADSA Annual Meeting, Jimenez, Esteban, Barragan, Adrian, 2022

The effects of administration of acetylsalicylic acid to dairy cows after calving on milk yield and health performance
2022 ADSA Annual Meeting, Piñeiro, Juan, Barragan, Adrian, 2022

The Endoplasmic Reticulum Stress Sensor IRE1α Regulates the UV DNA Repair Response through the Control of Intracellular Calcium Homeostasis
Journal of Investigative Dermatology, Son, Jeongin, Mogre, Saie, Chalmers, Fiona E., Ibinson, Jack, Worrell, Stephen, Glick, Adam B., 2022

Unrecognized diversity of mammalian orthoreoviruses in North American bats
Virology, Feng, Kurtis H., Brown, Justin D., Turner, Gregory G., Holmes, Edward C., Allison, Andrew B., 2022

Active and passive disease surveillance in wild turkeys (Meleagris gallopavo) from 2008 to 2018 in Pennsylvania, USA
Wildlife Society Bulletin, MacDonald, Amanda M., Johnson, Joshua B., Casalena, Mary Jo, Nemeth, Nicole M., Kunkel, Melanie, Blake, Mitchell, Brown, Justin D., 2022

Multi-Omics Strategies for Investigating the Microbiome in Toxicology Research
Toxicological Sciences, Morgan, E, Perdew, Gary H., Patterson, A, 2022

Novel insight into the role of the vitamin D receptor in the development and function of the immune system
Journal of Steroid Biochemistry and Molecular Biology, Arora, Juhi, Wang, Jinpeng, Weaver, Veronika, Zhang, Yongwei, Cantorna, Margherita T., 2022

Targeted deletion of TGFβ1 in basal keratinocytes causes profound defects in stratified squamous epithelia and aberrant melanocyte migration
Developmental Biology, Chalmers, Fiona E., Dusold, Justyn E., Shaik, Javed A., Walsh, Hailey A., Glick, Adam B., 2022

Interleukin-4 treatment reduces leukemia burden in acute myeloid leukemia
FASEB Journal, Qian, F, Arner, B, Kelly, Kathleen M., Annageldiyev, C, Sharma, Arati, Claxton, David F., Paulson, Robert F., Prabhu, K, 2022

Gestational Insulin Resistance Is Mediated by the Gut Microbiome–Indoleamine 2,3-Dioxygenase Axis
Gastroenterology, Priyadarshini, Medha, Navarro, Guadalupe, Reiman, Derek J., Sharma, Anukriti, Xu, Kai, Lednovich, Kristen, Manzella, Christopher R., Khan, Md Wasim, Garcia, Mariana Salas, Allard, Sarah, Wicksteed, Barton, Chlipala, George E., Szynal, Barbara, Bernabe, Beatriz Penalver, Maki, Pauline M., Gill, Ravinder K., Perdew, Gary H., Gilbert, Jack, Dai, Yang, Layden, Brian T., 2022

Anti-inflammatory therapy and daily milk and rumination
2022 Penn State Extension Annual Conference, Jimenez, Esteban, Barragan, Adrian, 2022

Safety and Covid vaccination differences between Spanish and English speaking workers in PA
2022 Penn State Extension Annual Conference, Martinez, Marcela, Barragan, Adrian, 2022

Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome
Gastroenterology, Chassaing, Benoit, Compher, Charlene, Bonhomme, Brittaney, Liu, Qing, Tian, Yuan, Walters, William, Nessel, Lisa, Delaroque, Clara, Hao, Fuhua, Gershuni, Victoria, Chau, Lillian, Ni, Josephine, Bewtra, Meenakshi, Albenberg, Lindsey, Bretin, Alexis, McKeever, Liam, Ley, Ruth E., Patterson, Andrew D., Wu, Gary D., Gewirtz, Andrew T., Lewis, James D., 2022

Virulome and genome analyses identify associations between antimicrobial resistance genes and virulence factors in highly drugresistant Escherichia coli isolated from veal calves
PLoS One, Haley, Bradd J., Kim, Seon Woo, Salaheen, Serajus, Hovingh, Ernest, Van Kessel, Jo Ann S., 2022

Fatal infection with Versteria sp. in a muskrat, with implications for human health
Journal of Veterinary Diagnostic Investigation, Niedringhaus, Kevin D., Ganoe, Laken S., Lovallo, Matthew, Walter, W. David, Yabsley, Michael J., Brown, Justin D., 2022

Feeding and nutrition, Saun, Robert J.Van, 2022

Highly Pathogenic Avian Influenza (HPAI): What to Look For
Lancaster Farming, Lighty, Megan, 2022

Inhalable SARS-CoV-2 Mimetic Particles Induce Pleiotropic Antigen Presentation
Biomacromolecules, Lawanprasert, Atip, Lawanprasert^, Atip, Simonson, Andrew W., Simonson^, Andrew, Sumner, Sarah, Nicol, McKayla, Pimcharoen, Sopida, Pimcharoen^, Sopida, Kirimanjeswara, Girish S., Medina*, Scott, 2022

Vitamin D and the Ability to Produce 1,25(OH)₂D Are Critical for Protection from Viral Infection of the Lungs
Nutrients, Arora, Juhi, Patel, Devanshi, Nicol, McKayla, Field, Cassandra, Restori, Katherine, Wang, Jinpeng, Froelich, Nicole, Katkere, Bhuvana, Terwilliger, Josey, Weaver, Veronika, others, None, Luley, Erin, Kelly, Kathleen, Kirimanjeswara, Girish S., Sutton, Troy, Cantorna, Margherita T., 2022

CCL27 is a crucial regulator of immune homeostasis of the skin and mucosal tissues
iScience, Davila, Micha, Xu, Ming, Huang, Chengyu, Gaddes, Erin, Winter, Levi, Cantorna, Margherita, Wang, Yong, Xiong, N, 2022

Transcriptional Profiling of the Small Intestine and the Colon Reveals Modulation of Gut Infection with Citrobacter rodentium According to the Vitamin A Status
Nutrients, Chai, Zhi, Lyu, Yafei, Chen, Q, Wei, Cheng-Hsin, Snyder, Lindsay, Snyder, I.M., Weaver, Veronika, Sebastian, Aswathy, Albert, Istv\'an, None, Albert, István, Li, Qunhua, Cantorna, Margherita, Ross, A, Ross, Catharine, others, None, 2022

The role of mouse and human peroxisome proliferator-activated receptor-α in modulating the hepatic effects of perfluorooctane sulfonate in mice
Toxicology, Su, S, Billy, Laura, Chang, Sue, Gonzalez, Frank, Patterson, Andrew D., Peters, Jeffrey, 2022

Metabolomic profiling of stool of two-year old children from the INSIGHT study reveals links between butyrate and BMI
Pediatric obesity, Nandy, D, Craig SJC, None, Cai, J, Tian, Y, Paul, I, Savage, J, Marini, M, Hohman, E, Reimherr, M, Patterson, Andrew, Makova, K, Chiaromonte, F, 2022

Diet standardization reduces intra-individual microbiome variation
Gut Microbes, Delaroque, Clara, Wu, Gary D., Compher, Charlene, Ni, Josephine, Albenberg, Lindsey, Liu, Qing, Tian, Yuan, Patterson, Andrew D., Lewis, James D., Gewirtz, Andrew T., Chassaing, Benoit, 2022

Bile acids and the gut microbiota: metabolic interactions and impacts on disease
Nature Reviews Microbiology, Collins, S, Stine, Jonathan, Bisanz, Jordan E., Okafor, C. Denise, Okafor, D, Patterson, Andrew, 2022

Development and Validation of Indirect Enzyme-Linked Immunosorbent Assays for Detecting Antibodies to SARS-CoV-2 in Cattle, Swine, and Chicken
Viruses, Vandegrift, Kurt, Gontu, Abhinay, Marlin, Erika, Ramasamy, Santhamani, Neerukonda, Sabarinath, Anil, Gayatri, Morgan, Jasmine, Quraishi, Meysoon, Chen, C, Boorla, Veda, Nissly, Ruth, Jakka, Padmaja, Chothe, Shubhada, Ravichandran, Abirami, Kodali, Nishitha, Amirthalingam, Saranya, LaBella, Lindsey, Kelly, Kathleen, Natesan, Pazhanivel, Minns, Allen, Rossi, Randall, Werner, Jacob R., Hovingh, Ernest, Lindner, Scott E., Tewari, Deepanker, Kapur, Vivek, Vandegrift, K, Maranas, Costas, Nair, Meera, Surendran Nair, M, Kuchipudi, Suresh V., Kuchipudi, Suresh, V, None, 2022

Heparin-Peptide Nanogranules for Thrombosis-Actuated Anticoagulation
Small, Lawanprasert, Atip, Pimcharoen, Sopida, Sumner, Sarah E., Watson, Connor T., Manning, Keefe B., Kirimanjeswara, Girish S., Medina, Scott H., 2022

High Prevalence of Antibodies against Canine Parvovirus and Canine Distemper Virus among Coyotes and Foxes from Pennsylvania: Implications for the Intersection of Companion Animals and Wildlife
Microbiology spectrum, Kimpston, Caellaigh, Hatke, Amanda, Castelli, Benjamin, Otto, Nathan, Tiffin, Hannah, Machtinger, Erika, Brown, Justin D., Van Why, Kyle, Marconi, Richard, 2022

Lymphoproliferative Diseases and Other Tumorigenic Viral Diseases, Brown, Justin, 2022

Bad behavior (brain abscesses), Brown, Justin, Fleegle, JT, 2022

What the heck is that – the role of public reporting in wildlife diseases, Brown, Justin, Fleegle, JT, 2022

Immersive learning technology at Penn State, Brown, Justin, 2022

Immune durability and protection against SARS-CoV-2 re-infection in Syrian hamsters
Emerging Microbes and Infections, Field, C, Heinly, T, Patel, D, Sim, D. G., Luley, E., Gupta, S, Vanderford, T, Wrammert, J, Sutton, T. C., 2022

Untargeted metabolomics for the study of antiinfective plants, Kellogg, Joshua J., 2022

Identification of T Peripheral Helper (Tph) Cells, Wacleche, Vanessa S., Wang, Runci, Rao, Deepak A., 2022

Lipoxygenase catalyzed metabolites derived from docosahexaenoic acid are promising antitumor agents against breast cancer
Scientific Reports, Chen, Kun Ming, Thompson, Henry, Vanden-Heuvel, John P., Sun, Yuan Wan, Trushin, Neil, Aliaga, Cesar, Gowda, Krishne, Amin, Shantu, Stanley, Bruce, Manni, Andrea, El-Bayoumy, Karam, 2021

Reconstitution of the host holobiont in germ-free born male rats acutely increases bone growth and affects marrow cellular content
Physiological Genomics, Czernik, Piotr J., Golonka, Rachel M., Chakraborty, Saroj, Yeoh, Beng San, Abokor, Ahmed A., Saha, Piu, Yeo, Ji Youn, Mell, Blair, Cheng, Xi, Baroi, Sudipta, Tian, Yuan, Patterson, Andrew D., Joe, Bina, Vijay-Kumar, Matam, Lecka-Czernik, Beata, 2021

Characterization of ketolactia in dairy cows during early lactation
Journal of Dairy Science, Kowalski, Z. M., Sabatowicz, M., Barć, J., Jagusiak, W., Młocek, W., Van Saun, R. J., Dechow, C. D., 2021

Comparison of sample types from white-tailed deer (Odocoileus virginianus) for DNA extraction and analyses
Scientific Reports, Edson, Jessie, Brown, Justin, Miller, William L., Walter, W. David, 2021

Surveillance for diseases, pathogens, and toxicants of muskrat (Ondatra zibethicus) in Pennsylvania and surrounding regions
PLoS One, Ganoe, Laken S., Brown, Justin D., Lovallo, Matthew J., Yabsley, Michael J., Garrett, Kayla B., Thompson, Alec T., Poppenga, Robert H., Ruder, Mark G., Walter, W. David, 2021

Chemometric-Guided Approaches for Profiling and Authenticating Botanical Materials
Frontiers in Nutrition, Abraham, Evelyn J., Kellogg, Joshua J., 2021

Targeting peroxisome proliferator-activated receptor-β/δ (pparβ/δ) for the treatment or prevention of alcoholic liver disease
Biological and Pharmaceutical Bulletin, Koga, Takayuki, Peters, Jeffrey M., 2021

Role of bile acids and gut bacteria in healthy ageing of centenarians
Nature, Rimal, Bipin, Patterson, Andrew D., 2021

Body condition in transition cows
Progressive Dairy, Barragan, Adrian, 2021

RetroCHMP3 blocks budding of enveloped viruses without blocking cytokinesis
Cell, Rheinemann, Lara, Downhour, Diane Miller, Bredbenner, Kate, Mercenne, Gaelle, Davenport, Kristen A., Schmitt, Phuong Tieu, Necessary, Christina R., McCullough, John, Schmitt, Anthony P., Simon, Sanford M., Sundquist, Wesley I., Elde, Nels C., 2021

High-throughput low-cost nl-qPCR for enteropathogen detection: A proof-ofconcept among hospitalized patients in Bangladesh
PLoS One, Flaherty, K, Grembi, Jessica, Ramachandran, V, Haque, F, Khatun, S, Rahman, Mahmudu, Maples, S, Becker, T, Spormann, A, Schoolnik, G, Hryckowian, A, Nelson, Eric, 2021

The aryl hydrocarbon receptor at the forefront of host-microbe interactions in the skin: A perspective on current knowledge gaps and directions for future research and therapeutic applications
Experimental Dermatology, van den Bogaard, Ellen H., Esser, Charlotte, Perdew, Gary H., 2021

Paramyxovirus-like particles as protein delivery vehicles
Journal of Virology, Panthi, Santosh, Schmitt, Phuong Tieu, Lorenz, F. Jeffrey, Stanfield, Brent A., Schmitt, Anthony P., 2021

The east asian gut microbiome is distinct from colocalized white subjects and connected to metabolic health
eLife, Ang, Q, Alba, D, Upadhyay, V, Bisanz, Jordan E., Cai, J, Lee, H, Barajas, E, Wei, G, Noecker, C, Patterson, Andrew D., Koliwad, S, Turnbaugh, P, 2021

Feed supplements: Microminerals and organic-chelated minerals, van Saun, Robert J., 2021

Assessment of influential factors for scours associated with cryptosporidium sp., rotavirus and coronavirus in calves from argentinean dairy farms
Animals, Bertoni, Emiliano, Barragán, Adrián A., Bok, Marina, Vega, Celina, Martínez, Marcela, Gil, José F., Cimino, Rubén O., Parreño, Viviana, 2021

Characterization of Avian Pox in a Ruffed Grouse (Bonasa umbellus) from Pennsylvania
Avian Diseases, Robinson, Corissa A., Dunn, Patricia A., Williams, Lisa M., Poulson, Rebecca L., Miller, Erica A., Brown, Holly M., Brown, Justin D., 2021

Exercise Training Reverses Gut Dysbiosis in Patients With Biopsy-Proven Nonalcoholic Steatohepatitis: A Proof of Concept Study
Clinical Gastroenterology and Hepatology, Hughes, Alexa, Dahmus, Jessica, Rivas, Gloriany, Hummer, Breianna, Chen See, Jeremy R., Wright, Justin R., Lamendella, Regina, Schmitz, Kathryn H., Sciamanna, Christopher, Ruffin, Mack, Patterson, Andrew D., Loomba, Rohit, Stine, Jonathan G., 2021

Toxoplasma gondii prevalence in carnivorous wild birds in the eastern United States
International Journal for Parasitology: Parasites and Wildlife, Ammar, Sawsan, Wood, Liberty, Su, Chunlei, Spriggs, Maria, Brown, Justin, Van Why, Kyle, Gerhold, Richard, 2021

RNAseq studies reveal distinct transcriptional response to vitamin A deficiency in small intestine versus colon, uncovering novel vitamin A-regulated genes
Nutrition Reports International, Chai, Zhi, Lyu, Yafei, Chen, Qiuyan, Wei, Cheng Hsin, Snyder, Lindsay M., Weaver, Veronika, Sebastian, Aswathy, Albert, István, Li, Qunhua, Cantorna, Margherita T., Ross, A. Catharine, 2021

Comparison of the effects of short-term feeding of sodium acetate and sodium bicarbonate on milk fat production
Journal of Dairy Science, Matamoros, C, Cai, J, Patterson, A, Harvatine, Kevin, 2021

Caloric restriction disrupts the microbiota and colonization resistance
Nature, von Schwartzenberg, R, Bisanz, Jordan, Lyalina, S, Spanogiannopoulos, P, Ang, Q, Cai, J, Dickmann, S, Friedrich, M, Liu, S, Collins, S, Ingebrigtsen, D, Miller, S, Turnbaugh, J, Patterson, Andrew D., Pollard, K, Mai, K, Spranger, J, Turnbaugh, P, 2021

Chorioptic mange in an American black bear (Ursus americanus) from Massachusetts, USA
Journal of Wildlife Diseases, Niedringhaus, Kevin D., Brown, Justin D., Murray, Maureen, Oliveira, Bruno C.M., Yabsley, Michael J., 2021

The aryl hydrocarbon receptor activates ceramide biosynthesis in mice contributing to hepatic lipogenesis
Toxicology, Liu, Q, Zhang, L, Allman, E, Hubbard, T, Murray, Iain A., Hao, F, Tian, Yuan, Gui, W, Nichols, R, Smith, Philip B., Anitha, M, Perdew, Gary, Patterson, Andrew D., 2021

Modulating inflammation after calving may improve cow health and performance
Progressive Dairy, Barragan, Adrian, 2021

The Enigma of AHR Activation in the Skin: Interplay among Ligands, Metabolism, and Bioavailability
Journal of Investigative Dermatology, van den Bogaard, Ellen H., Perdew, Gary H., 2021

Accumulating evidence to support the safe and efficacious use of a proprietary blend of capsaicinoids in mediating risk factors for obesity
Food Science and Nutrition, Mariwala, Javahar Kohli, Rai, Deshanie, Padigaru, Muralidhara, Ashok Morde, Abhijeet, Maddox, Ewa, Maalouf, Samar, Smith, Kayla, Vanden Heuvel, John P., 2021

The Pretreatment Gut Microbiome Is Associated With Lack of Response to Methotrexate in New-Onset Rheumatoid Arthritis
Arthritis and Rheumatology, Artacho, Alejandro, Isaac, Sandrine, Nayak, Renuka, Flor-Duro, Alejandra, Alexander, Margaret, Koo, Imhoi, Manasson, Julia, Smith, Philip B., Rosenthal, Pamela, Homsi, Yamen, Gulko, Percio, Pons, Javier, Puchades-Carrasco, Leonor, Izmirly, Peter, Patterson, Andrew, Abramson, Steven B., Pineda-Lucena, Antonio, Turnbaugh, Peter J., Ubeda, Carles, Scher, Jose U., 2021

Transmission and protection against reinfection in the ferret model with the SARS-CoV-2 USA-WA1/2020 reference isolate
Journal of Virology, Patel, Devanshi, Field, Cassandra, Septer, Kayla, Sim, Derek G., Jones, Matthew J., Heinly, T, Vanderford, Thomas, McGraw, Elizabeth A., Sutton, Troy, 2021

Raldh activity induced by bacterial/fungal pathogens in cd16+ monocyte-derived dendritic cells boosts hiv infection and outgrowth in cd4+ t cells
Journal of Immunology, Cattin, Amelie, Wacleche, Vanessa Sue, Do Rosario, Natalia Fonseca, Marchand, Laurence Raymond, Dias, Jonathan, Gosselin, Annie, Cohen, Eric A., Estaquier, Jerome, Chomont, Nicolas, Routy, Jean Pierre, Ancuta, Petronela, 2021

Differential immune response following intranasal and intradermal infection with francisella tularensis: Implications for vaccine development
Microorganisms, Nicol, McKayla J., Williamson, David R., Place, David E., Kirimanjeswara, Girish S., 2021

Assessing Transporter-Mediated Natural Product-Drug Interactions Via In vitro-In Vivo Extrapolation: Clinical Evaluation With a Probe Cocktail
Clinical Pharmacology and Therapeutics, Nguyen, James T., Tian, Dan Dan, Tanna, Rakshit S., Hadi, Deena L., Bansal, Sumit, Calamia, Justina C., Arian, Christopher M., Shireman, Laura M., Molnár, Bálint, Horváth, Miklós, Kellogg, Joshua J., Layton, Matthew E., White, John R., Cech, Nadja B., Boyce, Richard D., Unadkat, Jashvant D., Thummel, Kenneth E., Paine, Mary F., 2021

Interlaboratory Comparison of Untargeted Mass Spectrometry Data Uncovers Underlying Causes for Variability
Journal of Natural Products, Clark, Trevor N., Houriet, Joëlle, Vidar, Warren S., Kellogg, Joshua J., Todd, Daniel A., Cech, Nadja B., Linington, Roger G., 2021

Methotrexate impacts conserved pathways in diverse human gut bacteria leading to decreased host immune activation
Cell Host and Microbe, Nayak, Renuka R., Alexander, Margaret, Deshpande, Ishani, Stapleton-Gray, Kye, Rimal, Bipin, Patterson, Andrew D., Ubeda, Carles, Scher, Jose U., Turnbaugh, Peter J., 2021

Poultry Diseases: Where to Get Help
Penn State Extension Website, Lighty, Megan, Dunn, P, 2021

Ecology of an Isolated Muskrat Population during Regional Population Declines
Northeastern Naturalist, Ganoe, Laken S., Lovallo, Matthew J., Brown, Justin D., Walter, W. David, 2021

Assessing Transporter-Mediated Natural Product-Drug Interactions Via In vitro-In Vivo Extrapolation: Clinical Evaluation With a Probe Cocktail
Clinical Pharmacology & Therapeutics, Nguyen, James, Tian, Dan-Dan, Tanna, Rakshit, Hadi, Deena, Bansal, Sumit, Calamia, Justina, Arian, Christopher, Shireman, None, Molnar, Balint, Horvath, Miklos, Kellogg, Josh, Layton, Matthew, White, John, Cech, Nadja, Boyce, Richard, Unadkat, Jashvant, Thummel, Kenneth, Paine, Mary, 2021

Metagenomic Analysis of the Microbial Communities and Resistomes of Veal Calf Feces
Frontiers in Microbiology, Salaheen, Serajus, Kim, Seon Woo, Hovingh, Ernest, Van Kessel, Jo Ann S., Haley, Bradd J., 2021

Secondary bile acid ursodeoxycholic acid alters weight, the gut microbiota, and the bile acid pool in conventional mice
PLoS One, Winston, Jenessa A., Rivera, Alissa, Cai, Jingwei, Patterson, Andrew D., Theriot, Casey M., 2021

Roux-en-Y Gastric Bypass Surgery Has Early Differential Effects on Bile Acids and the Levels of Complement Component 3 and Acylation-Stimulating Protein.
Obesity surgery, Noel, O, Chu, X, Patterson, Andrew, Edwards, M, Still, C, Gerhard, G, 2021

Development of a swine RNA polymerase I driven Influenza reverse genetics system for the rescue of type A and B Influenza viruses
Journal of Virological Methods, Seibert, Brittany, Angel, Matthew, Caceres, C. Joaquin, Sutton, Troy, Kumar, Ayush, Ferreri, Lucas, Cardenas-Garcia, Stivalis, Geiger, Ginger, Rajao, Daniela, Perez, Daniel R., 2021

A Global Cross-laboratory Exercise to Improve Standardization of Ferret Transmission Studies, Besler, Jessica, Yen, Hui-Ling, Septer, Kayla, Sim, D, Sutton, Troy, 2021

Anti-N1 antibodies induced by intramuscular vaccination do not block airborne transmission of pandemic H1N1 influenza A in ferrets, Septer, Kayla, Sim, D, Patel, Devanshi, Field, Cassandra, Heinly, Talia, Sutton, Troy, 2021

Redefining the targets of the vitamin D receptor (VDR) utilizing a novel VDR reporter mouse.
The Journal of Immunology, Arora, Juhi, Cantorna, Margherita, 2021

A novel clinically relevant graft-versus-leukemia model in humanized mice
Journal of Leukocyte Biology, Jia, B, Zhao, C, Bayerl, Michael, Shike, Hiroko, Claxton, David F., Ehmann, W, Mineishi, Shin, Schell, Todd D., Zheng, P, Zhang, Y, Shultz, L, Prabhu, K. Sandeep, Paulson, Robert, Zheng, Hong, 2021

Diminished Hepatocarcinogenesis by a Potent, High-Affinity Human PPARα Agonist in PPARA-Humanized Mice
Toxicological Sciences, Foreman, Jennifer E., Koga, Takayuki, Kosyk, Oksana, Kang, Boo Hyon, Zhu, Xiaoyang, Cohen, Samuel M., Billy, Laura J., Sharma, Arun K., Amin, Shantu, Gonzalez, Frank J., Rusyn, Ivan, Peters, Jeffrey M., 2021

Species Differences between Mouse and Human PPARα in Modulating the Hepatocarcinogenic Effects of Perinatal Exposure to a High-Affinity Human PPARα Agonist in Mice
Toxicological Sciences, Foreman, Jennifer E., Koga, Takayuki, Kosyk, Oksana, Kang, Boo Hyon, Zhu, Xiaoyang, Cohen, Samuel M., Billy, Laura J., Sharma, Arun K., Amin, Shantu, Gonzalez, Frank J., Rusyn, Ivan, Peters, Jeffrey M., 2021

Current Challenges and Recent Developments in Mass Spectrometry-Based Metabolomics
Annual Review of Analytical Chemistry, Collins, Stephanie, Koo, Imhoi, Peters, Jeffrey, Smith, Philip B., Patterson, Andrew D., 2021

Macrophage Selenoproteins Restrict Intracellular Replication of Francisella tularensis and Are Essential for Host Immunity
Frontiers in Immunology, Markley, Rachel, Restori, Katherine, Katkere, Bhuvana, Sumner, Sarah, Nicol, McKayla, Tyryshkina, Anastasia, Nettleford, Shaneice, Williamson, David, Place, David, Dewan, Kalyan, Shay, Ashley, others, None, Carlson, Bradley, Girirajan, Santhosh, Prabhu, K. Sandeep, Kirimanjeswara, Girish S., 2021

Selenium-dependent metabolic reprogramming during inflammation and resolution
Journal of Biological Chemistry, Korwar, A, Hossain, A, Lee, T, Shay, Ashley, Basrur, V, Conlon, K, Smith, Philip B., Carlson, B, Salis, Howard M., Patterson, Andrew D., Prabhu, K. Sandeep, 2021

Quantitative analysis of bile acid with UHPLC-MS/MS, Tian, Yuan, Cai, Jingwei, Allman, Erik L., Smith, Philip B., Patterson, Andrew D., 2021

Sample preparation and data analysis for NMR-based metabolomics
Translational Bioinformatics for Therapeutic Development, Mal, T., Tian, Yuan, Patterson, Andrew D., 2021

Impaired intestinal akkermansia muciniphila and aryl hydrocarbon receptor ligands contribute to nonalcoholic fatty liver disease in mice
mSystems, Shi, Zunji, Lei, Hehua, Chen, Gui, Yuan, Peihong, Cao, Zheng, Ser, Hooi Leng, Zhu, Xuehang, Wu, Fang, Liu, Caixiang, Dong, Manyuan, Song, Yuchen, Guo, Yangyang, Chen, Chuan, Hu, Kexin, Zhu, Yifan, Zeng, Xin An, Zhou, Jinlin, Lu, Yujing, Patterson, Andrew D., Zhang, Limin, 2021

Metabolomic profiling of stool of two-year old children from the INSIGHT study reveals links between butyrate and child weight outcomes
Pediatric obesity, Nandy, Debmalya, Craig, Sarah J.C., Cai, Jingwei, Tian, Yuan, Paul, Ian, Savage, Jennifer, Williams, Jennifer Savage, Marini, Michelle, Hohman, Emily, Reimherr, Matthew Logan, Patterson, Andrew David, Makova, Kateryna Dmytrivna, Chiaromonte, Francesca, 2021

West nile virus infection in ruffed grouse (Bonasa umbellus) in pennsylvania, usa: A multi-year comparison of statewide serosurveys and vector indices
Journal of Wildlife Diseases, Nemeth, Nicole M., Williams, Lisa M., Bosco-Lauth, Angela M., Oesterle, Paul T., Helwig, Matt, Bowen, Richard A., Brown, Justin D., 2021

Surveillance for babesia odocoilei in hunter-harvested wild-elk (Cervus elaphus canadensis) from Pennsylvania, USA (2016–2017)
Veterinary Sciences, Calvente, Elizabeth Jean, Steber, Clay, Brown, Justin, Brown, Holly, Banfield, Jeremiah, Chinnici, Nicole, 2021

Prevalence and distribution of multilocus sequence types of Staphylococcus aureus isolated from bulk tank milk and cows with mastitis in Pennsylvania
PLoS One, Thomas, Asha, Chothe, Shubhada, Byukusenge, Maurice, Mathews, Tammy, Pierre, Traci, Kariyawasam, S, Luley, Erin, Kuchipudi, S, Jayarao, Bhushan, 2021

A Highly Sensitive and Specific Probe-Based Real-Time PCR for the Detection of Avibacterium paragallinarum in Clinical Samples From Poultry
Frontiers in Veterinary Science, Kuchipudi, Suresh, V, None, Kuchipudi, Suresh V., Yon, Michele, Nair, Meera, Surendran Nair, Meera, Byukusenge, Maurice, Barry, Rhiannon, Nissly, R, Williams, Jen, Pierre, Traci, Mathews, Tammy, Walner-Pendleton, Eva, Dunn, P, Barnhart, Denise, Loughrey, Sean, Davison, Sherrill, Kelly, Dona, Tewari, Deepanker, Jayarao, Bhushan M., 2021

Complete genome sequences of six staphylococcus pseudintermedius strains from dogs with superficial pyoderma in georgia, USA
Genome Announcements, Byukusenge, Maurice, Banovic, Frane, Li, L, Kuchipudi, Suresh, V, None, Kuchipudi, Suresh V., Jayarao, Bhushan M., Watson, Cynthia, Naikare, Hemant, 2021

A thermogenic fat-epithelium cell axis regulates intestinal disease tolerance
Proceedings of the National Academy of Sciences of the United States of America, Man, K, Bowman, C, Braverman, K, Escalante, V, Tian, Y, Bisanz, Jordan, Ganeshan, K, Wang, B, Patterson, Andrew, Bayrer, J, Turnbaugh, P, Chawla, A, 2020

How ah receptor ligand specificity became important in understanding its physiological function
International Journal of Molecular Sciences, Murray, Iain A., Perdew, Gary H., 2020

Author Correction: Gut microbiota plasticity is correlated with sustained weight loss on a low-carb or low-fat dietary intervention (Scientific Reports, (2020), 10, 1, (1405), 10.1038/s41598-020-58000-y)
Scientific Reports, Grembi, Jessica A., Nguyen, Lan H., Haggerty, Thomas D., Gardner, Christopher D., Holmes, Susan P., Parsonnet, Julie, 2020

β-Naphthoflavone activation of the Ah receptor alleviates irradiation-induced intestinal injury in mice
Antioxidants, Zhou, Xiaoliang, Li, Deguan, Xu, Wenqing, Zhang, Heng, Wang, Hao, Perdew, Gary H., 2020

Prevalence of winter ticks (Dermacentor albipictus) in hunter-harvested wild elk (cervus canadensis) from pennsylvania, USA (2017–2018)
Veterinary Sciences, Calvente, Elizabeth, Pelletier, Samantha, Banfield, Jeremiah, Brown, Justin, Chinnici, Nicole, 2020

Association of prepartum lying time with nonesterified fatty acids and stillbirth in prepartum dairy heifers and cows
Journal of Dairy Science, Menichetti, B. T., Piñeiro, J. M., Barragan, A. A., Relling, A. E., Garcia-Guerra, A., Schuenemann, G. M., 2020

Administration of acetylsalicylic acid after parturition in lactating dairy cows under certified organic management: Part II. Biomarkers of nociception, inflammation, and stress
Journal of Dairy Science, Barragan, A. A., Bauman, L. M., Schuenemann, G. M., Velez, J., Lakritz, J., Coetzee, J. F., Gonzalez, J. D.Rozo, Piñeiro, J. M., Menichetti, B., Bas, S., 2020

Administration of acetylsalicylic acid after parturition in lactating dairy cows under certified organic management: Part I. Milk yield, milk components, activity patterns, fertility, and health
Journal of Dairy Science, Barragan, A. A., Bauman, L., da Costa, L., Velez, J., Gonzalez, J. D.Rozo, Schuenemann, G. M., Menichetti, B., Piñeiro, J., Bas, S., 2020

Quantification for non-targeted LC/MS screening without standard substances
Scientific Reports, Liigand, Jaanus, Wang, Tingting, Kellogg, Joshua, Smedsgaard, Jørn, Cech, Nadja, Kruve, Anneli, 2020

Chemical composition and biological effects of kratom (Mitragyna speciosa): In vitro studies with implications for efficacy and drug interactions
Scientific Reports, Todd, D. A., Kellogg, J. J., Wallace, E. D., Khin, M., Flores-Bocanegra, L., Tanna, R. S., McIntosh, S., Raja, H. A., Graf, T. N., Hemby, S. E., Paine, M. F., Oberlies, N. H., Cech, N. B., 2020

Intestinal microbiota-derived tryptophan metabolites are predictive of Ah receptor activity
Gut Microbes, Dong, Fangcong, Hao, Fuhua, Murray, Iain A., Smith, Philip B., Koo, Imhoi, Tindall, Alyssa, Kris-Etherton, Penny, Gowda, Krishne, Amin, Shantu G., Patterson, Andrew D., Perdew, Gary, 2020

A tissue digestion protocol for measuring Sarcoptes scabiei (astigmata: Sarcoptidae) density in skin biopsies
Journal of Insect Science, Tiffin, Hannah S., Cockerill, Robert, Brown, Justin D., Machtinger, Erika T., 2020

Granulomatous Inflammation of the Muzzle in White-Tailed Deer (Odocoileus virginianus) and Mule Deer (Odocoileus hemionus) Associated With Mannheimia granulomatis
Pathologia veterinaria, Keel, M. Kevin, Keeler, Shamus, Brown, Justin, Fenton, Heather, Munk, Brandon, Gerhold, Rick, Gottdenker, Nicole, Ruder, Mark, Elsmo, Elizabeth, Nemeth, Nicole, 2020

Development of SKI-349, a dual-targeted inhibitor of sphingosine kinase and microtubule polymerization
Bioorganic and Medicinal Chemistry Letters, Hengst, Jeremy A., Hegde, Shailaja, Paulson, Robert F., Yun, Jong K., 2020

Retinoid Signaling in Intestinal Epithelial Cells Is Essential for Early Survival From Gastrointestinal Infection
Frontiers in Immunology, Snyder, Lindsay M., Arora, Juhi, Kennett, Mary J., Weaver, Veronika, Cantorna, Margherita T., 2020

Highlights from the 22nd workshop on vitamin D in New York City, May 2019
Journal of Steroid Biochemistry and Molecular Biology, Fleet, James C., Bernal-Mizrachi, Carlos, Hewison, Martin, Jorde, Rolf, White, John, Cantorna, Margherita, Schoenmakers, Inez, Erben, Reinhold, 2020

Photocontrolled miR-148b nanoparticles cause apoptosis, inflammation and regression of Ras induced epidermal squamous cell carcinomas in mice
Biomaterials, Liu, Yiming, Bailey, Jacob T., Abu-Laban, Mohammad, Li, Shue, Chen, Cong, Glick, Adam B., Hayes, Daniel J., 2020

How gut microbiome interactions affect nutritional traits of Drosophila melanogaster
Journal of Experimental Biology, McMullen, John G., Peters-Schulze, Grace, Cai, Jingwei, Patterson, Andrew D., Douglas, Angela E., 2020

Stress erythropoiesis: definitions and models for its study
Experimental Hematology, Paulson, Robert F., Hariharan, Sneha, Little, Jane A., 2020

Effects of postpartum acetylsalicylic acid on metabolic status, health, and production in lactating dairy cattle
Journal of Dairy Science, Barragan, A. A., Hovingh, E., Bas, S., Lakritz, J., Byler, L., Ludwikowski, A., Takitch, S., Zug, J., Hann, S., 2020

Surveillance for Borrelia spp. in upland game birds in Pennsylvania, USA
Veterinary Sciences, Cleveland, Christopher A., Swanepoel, Liandrie, Brown, Justin D., Casalena, Mary Jo, Williams, Lisa, Yabsley, Michael J., 2020

Exercise Training Reverses Gut Dysbiosis in Patients With Biopsy-Proven Nonalcoholic Steatohepatitis: A Proof of Concept Study.
Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association, Hughes, A, Dahmus, J, Rivas, G, Hummer, B, Chen See, J, Wright, J, Lamendella, R, Schmitz, K, Sciamanna, C, Ruffin, M, Patterson, Andrew, Loomba, R, Stine, J, 2020

Gold standard cholera diagnostics are tarnished by lytic bacteriophage and antibiotics
Journal of Clinical Microbiology, Nelson, Eric, Grembi, Jessica, Chao, D, Andrews, J, Alexandrova, L, Rodriguez, P, Ramachandran, V, Sayeed, M, Wamala, J, Debes, A, Sack, D, Hryckowian, A, Haque, F, Khatun, S, Rahman, M, Chien, A, Spormann, A, Schoolnik, G, 2020

Mdm2-dependent rewiring of metabolomic and lipidomic profiles in dedifferentiated liposarcoma models
Cancers, Patt, Andrew, Demoret, Bryce, Stets, Colin, Bill, Kate Lynn, Smith, Philip, Vijay, Anitha, Patterson, Andrew, Hays, John, Hoang, Mindy, Chen, James L., Mathé, Ewy A., 2020

Lipocalin 2 deficiency-induced gut microbiota dysbiosis evokes metabolic syndrome in aged mice
Physiological Genomics, Singh, Vishal, Galla, Sarah, Golonka, Rachel M., Patterson, Andrew D., Chassaing, Benoit, Joe, Bina, Vijay-Kumar, Matam, 2020

Metabolic profiling reveals aggravated non-alcoholic steatohepatitis in high-fat high-cholesterol diet-fed apolipoprotein e-deficient mice lacking ron receptor signaling
Metabolites, Allen, Joselyn N., Dey, Adwitia, Cai, Jingwei, Zhang, Jingtao, Tian, Yuan, Kennett, Mary, Ma, Yanling, Liang, T. Jake, Patterson, Andrew D., Hankey-Giblin, Pamela A., 2020

Differences in the Microbial Community and Resistome Structures of Feces from Preweaned Calves and Lactating Dairy Cows in Commercial Dairy Herds
Foodborne Pathogens and Disease, Haley, Bradd J., Kim, Seon Woo, Salaheen, Serajus, Hovingh, Ernest, Van Kessel, Jo Ann S., 2020

The Chemistry of Kratom [ Mitragyna speciosa]: Updated Characterization Data and Methods to Elucidate Indole and Oxindole Alkaloids
Journal of Natural Products, Flores-Bocanegra, Laura, Raja, Huzefa A., Graf, Tyler N., Augustinović, Mario, Wallace, E. Diane, Hematian, Shabnam, Kellogg, Joshua J., Todd, Daniel A., Cech, Nadja B., Oberlies, Nicholas H., 2020

High-Throughput Multiparallel Enteropathogen Detection via Nano-Liter qPCR
Frontiers in cellular and infection microbiology, Grembi, Jessica, Mayer-Blackwell, K, Luby, S, Spormann, A, 2020

Epo receptor signaling in macrophages alters the splenic niche to promote erythroid differentiation
Blood, Chen, Y, Xiang, J, Qian, F, Diwakar, B, Ruan, B, Hao, S, Prabhu, K, Sandeep Prabhu, K., Paulson, Robert F., 2020

The Essential Role of Selenoproteins in the Resolution of Citrobacter rodentium-Induced Intestinal Inflammation
Frontiers in Nutrition, Nettleford, S, Zhao, L, Qian, F, Herold, M, Arner, B, Desai, Dhimant, Amin, Shantu, Xiong, N, Singh, Vishal, Carlson, B, Prabhu, K. Sandeep, 2020

The microbiome modulating activity of bile acids
Gut Microbes, Tian, Yuan, Gui, Wei, Koo, Imhoi, Smith, Philip B., Allman, Erik L., Nichols, Robert G., Rimal, Bipin, Cai, Jingwei, Liu, Qing, Patterson, Andrew D., 2020

Vancomycin prevents fermentable fiber-induced liver cancer in mice with dysbiotic gut microbiota
Gut Microbes, Singh, Vishal, Yeoh, Beng San, Abokor, Ahmed, Golonka, Rachel, Tian, Yuan, Patterson, Andrew D., Joe, Bina, Heikenwalder, Mathias, Vijay-Kumar, Matam, 2020

Identification of adulteration in botanical samples with untargeted metabolomics
Fresenius Zeitschrift fur Analytische Chemie, Wallace, E. Diane, Todd, Daniel A., Harnly, James M., Cech, Nadja B., Kellogg, Joshua J., 2020

Re-engineering Antimicrobial Peptides into Oncolytics Targeting Drug-Resistant Ovarian Cancers
Cellular and Molecular Bioengineering, Aronson, M, Aronson^, Matthew, Dahl, Erika, Halle, J, Halle^, Jacob, Simonson^, Andrew, Simonson, A, Gogal, Rose, Glick, Adam B., Aird, K, Medina, Scott H., 2020

A field case study: Body condition change and metabolic status of transition cows in a small dairy farm.
2020 ADSA Annual Meeting, Rosales, Mauricio, Barragan, Adrian, 2020

Assessment of the effect of intrauterine dextrose infusion on clinical cure rate, daily milk yield and daily rumination in post-partum dairy cows diagnosed with clinical metritis
2020 ADSA Annual Meeting, Hamilton, Julia, Barragan, Adrian, 2020

Anti-N1 antibodies induced by intramuscular vaccination do not block airborne transmission of pandemic H1N1 influenza A in ferrets, Septer, Kayla, Patel, Devanshi, Sutton, Troy, 2020

Ketogenic Diets Alter the Gut Microbiome Resulting in Decreased Intestinal Th17 Cells
Cell, Ang, Qi Yan, Alexander, Margaret, Newman, John C., Tian, Yuan, Cai, Jingwei, Upadhyay, Vaibhav, Turnbaugh, Jessie A., Verdin, Eric, Hall, Kevin D., Leibel, Rudolph L., Ravussin, Eric, Rosenbaum, Michael, Patterson, Andrew D., Turnbaugh, Peter J., 2020

Ursodeoxycholic acid (udca) mitigates the host inflammatory response during clostridioides difficile infection by altering gut bile acids
Infection and Immunity, Winston, Jenessa A., Rivera, Alissa J., Cai, Jingwei, Thanissery, Rajani, Montgomery, Stephanie A., Patterson, Andrew D., Theriot, Casey M., 2020

Nonalcoholic steatohepatitis Fitness Intervention in Thrombosis (NASHFit): Study protocol for a randomized controlled trial of a supervised aerobic exercise program to reduce elevated clotting risk in patients with NASH
Contemporary Clinical Trials Communications, Stine, Jonathan G., Schreibman, Ian, Navabi, Seyedehsan, Kang, Mitchell, Dahmus, Jessica, Soriano, Christopher, Rivas, Gloriany, Hummer, Breianna, Beyer, Megan, Tressler, Heather, Kimball, Scot R., Patterson, Andrew D., Schmitz, Kathryn, Sciamanna, Christopher, 2020

Bacterial colonization reprograms the neonatal gut metabolome
Nature Microbiology, Bittinger, Kyle, Zhao, Chunyu, Li, Yun, Ford, Eileen, Friedman, Elliot S., Ni, Josephine, Kulkarni, Chiraag V., Cai, Jingwei, Tian, Yuan, Liu, Qing, Patterson, Andrew D., Sarkar, Debolina, Chan, Siu H.J., Maranas, Costas, Saha-Shah, Anumita, Lund, Peder, Garcia, Benjamin A., Mattei, Lisa M., Gerber, Jeffrey S., Elovitz, Michal A., Kelly, Andrea, DeRusso, Patricia, Kim, Dorothy, Hofstaedter, Casey E., Goulian, Mark, Li, Hongzhe, Bushman, Frederic D., Zemel, Babette S., Wu, Gary D., 2020

Surveillance for Heterakis spp. in Game Birds and Cage-Free, Floor-Raised Poultry in Pennsylvania
Avian Diseases, Greenawalt, Denver, Yabsley, Michael J., Williams, Lisa, Casalena, Mary Jo, Boyd, Robert, Debelak, Erin, Wildlicka, Hanna, Phillips, Edward, Wallner-Pendleton, Eva, Dunn, Patricia, Brown, Justin, 2020

Chemical evaluation of the effects of storage conditions on the botanical goldenseal using marker-based and metabolomics approaches
Yale Journal of Biology and Medicine, Khin, Manead, Cech, Nadja B., Kellogg, Joshua J., Caesar, Lindsay K., 2020

Shared bacterial communities between soil, stored drinking water, and hands in rural Bangladeshi households
Water Research X, Fuhrmeister, E, Ercumen, A, Grembi, Jessica, Islam, Mahfuza, Pickering, A, Nelson, Kara, 2020

A Review of Pathogens, Diseases, and Contaminants of Muskrats (Ondatra zibethicus) in North America
Frontiers in Veterinary Science, Ganoe, Laken S., Brown, Justin D., Yabsley, Michael J., Lovallo, Matthew J., Walter, W. David, 2020

Improving HIV Outgrowth by Optimizing Cell-Culture Conditions and Supplementing With all-trans Retinoic Acid
Frontiers in Microbiology, Zhang, Yuwei, Planas, Delphine, Raymond Marchand, Laurence, Massanella, Marta, Chen, Huicheng, Wacleche, Vanessa Sue, Gosselin, Annie, Goulet, Jean Philippe, Filion, Mario, Routy, Jean Pierre, Chomont, Nicolas, Ancuta, Petronela, 2020

STING-dependent type-1 interferon restrains schistosome immunopathology via down-regulation of the CD209a lectin receptor
The Journal of Immunology, Kalantari, Parisa, 2020

Preferential Perinatal Development of Skin-Homing NK1.1⁺ Innate Lymphoid Cells for Regulation of Cutaneous Microbiota Colonization
iScience, Yang, Jie, Restori, Katherine H., Xu, Ming, Song, Eun Hyeon, Zhao, Luming, Hu, Shaomin, Lyu, Pingyun, Wang, Wei-bei, Xiong, Na, 2020

Targeting the pregnane X receptor using microbial metabolite mimicry
EMBO Molecular Medicine, Dvořák, Zdeněk, Kopp, Felix, Costello, Cait M., Kemp, Jazmin S., Li, Hao, Vrzalová, Aneta, Štěpánková, Martina, Bartoňková, Iveta, Jiskrová, Eva, Poulíková, Karolína, Vyhlídalová, Barbora, Nordstroem, Lars U., Karunaratne, Chamini V., Ranhotra, Harmit S., Mun, Kyu Shik, Naren, Anjaparavanda P., Murray, Iain A., Perdew, Gary H., Brtko, Julius, Toporova, Lucia, Schön, Arne, Wallace, William G., Walton, William G., Redinbo, Matthew R., Sun, Katherine, Beck, Amanda, Kortagere, Sandhya, Neary, Michelle C., Chandran, Aneesh, Vishveshwara, Saraswathi, Cavalluzzi, Maria M., Lentini, Giovanni, Cui, Julia Yue, Gu, Haiwei, March, John C., Chatterjee, Shirshendu, Matson, Adam, Wright, Dennis, Flannigan, Kyle L., Hirota, Simon A., Sartor, Ryan Balfour, Mani, Sridhar, 2020

Serology as a tool to investigate sarcoptic mange in american black bears (Ursus Americanus)
Journal of Wildlife Diseases, Niedringhaus, Kevin D., Brown, Justin D., Ternent, Mark, Peltier, Sarah K., van Wick, Peach, Yabsley, Michael J., 2020

A baylisascaris outbreak in fox squirrels (Sciurus niger) and subsequent detection of francisella tularensis in Kansas, USA
Journal of Wildlife Diseases, Vincent, Emily C., Ruder, Mark G., Yabsley, Michael J., Hesting, Vincent S., Keel, M. Kevin, Brown, Justin D., Nemeth, Nicole M., 2020

Stress Erythropoiesis is a Key Inflammatory Response
Cells, Paulson, Robert F., Ruan, Baiye, Hao, Siyang, Chen, Yuanting, 2020

Ultrasound-Guided Cytosolic Protein Delivery via Transient Fluorous Masks
ACS Nano, Sloand, Janna, Sloand^, Janna, Cook, Eric, Nguyen, Theodore, Zinck, Scott A., Zimudzi, Tawanda, Cook, Erik C., Zinck, Scott, Showalter, S, Zimudzi, Tawanda J., Schowalter, Scott, Showalter, Scott A., Simon, Julianna, Medina, S, Glick, Adam B., Simon, Julianna, Medina*, Scott, 2020

PCB126 blocks the thermogenic beiging response of adipocytes
Environmental Science and Pollution Research, Gourronc, Francoise A., Perdew, Gary H., Robertson, Larry W., Klingelhutz, Aloysius J., 2020

Antibacterial effects of low-temperature plasma generated by atmospheric-pressure plasma jet are mediated by reactive oxygen species
Scientific Reports, Nicol, M, Brubaker, T, Honish, 2nd, B, Honish, Brian J., Simmons, A, Kazemi, A, Geissel, M, Whalen, C, Siedlecki, Christopher, Bilen, S, Bilén, Sven G., Knecht, S, Kirimanjeswara, Girish S., 2020

Selective Ah receptor modulators attenuate NPC1L1-mediated cholesterol uptake through repression of SREBP-2 transcriptional activity
Laboratory Investigation, Muku, G, Kusnadi, A, Kuzu, G, Tanos, R, Murray, Iain A., Gowda, Krishne, Amin, Shantu, Perdew, Gary, 2020

Moving forward with ToxSci
Toxicological Sciences, Peters, Jeffrey M., 2020

Gut microbiota plasticity is correlated with sustained weight loss on a low-carb or low-fat dietary intervention
Scientific Reports, Grembi, Jessica, Nguyen, L, Haggerty, T, Gardner, C, Holmes, S, Parsonnet, J, 2020

Influence of Dielectric Coatings on Pin-to-Rod Nanosecond-Pulsed Discharges in Phosphate-Buffered Saline
IEEE Transactions on Radiation and Plasma Medical Sciences, Brubacker, Timothy, Brubaker, Timothy, Nicol, McKayla, Kirimanjeswara, Girish Soorapp, Siedlecki, Christopher, Kazemi, Ali, Snyder, Philip, Synder, Philip, Bilen, S, Bilén, Sven, Knetch, Sean, Knecht, Sean, 2020

Composite score analysis for unsupervised comparison and network visualization of metabolomics data
Analytica Chimica Acta, Kellogg, Joshua J., Kvalheim, Olav M., Cech, Nadja B., 2020

Microbial Metabolite Signaling Is Required for Systemic Iron Homeostasis
Cell Metabolism, Das, Nupur K., Schwartz, Andrew J., Barthel, Gabrielle, Inohara, Naohiro, Liu, Qing, Sankar, Amanda, Hill, David R., Ma, Xiaoya, Lamberg, Olivia, Schnizlein, Matthew K., Arqués, Juan L., Spence, Jason R., Nunez, Gabriel, Patterson, Andrew D., Sun, Duxin, Young, Vincent B., Shah, Yatrik M., 2020

The aryl hydrocarbon receptor as a mediator of host-microbiota interplay
Gut Microbes, Dong, Fangcong, Perdew, Gary H., 2020

Change is Good: What is New for ToxSci?
Toxicological Sciences, Peters, Jeffrey M., 2020

Perfluorooctane sulfonate alters gut microbiota-host metabolic homeostasis in mice
Toxicology, Zhang, Limin, Rimal, Bipin, Nichols, Robert, Tian, Yuan, Smith, Philip B., Hatzakis, Emmanuel, Chang, Shu-Ching, Butenhoff, John, Peters, Jeffrey, Patterson, Andrew D., 2020

Detection and removal of biologically active organic micropollutants from hospital wastewater
Science of the Total Environment, Castillo Meza, Luis, Piotrowski, Paulina, Farnan, James, Tasker, Travis, Xiong, Boya, Weggler, Benedikt, Murrell, Kyra, Dorman, Jr., Franklin Lewis, Dorman, F, Vanden Heuvel, John P., Burgos, William, 2020

Roux-en-Y Gastric Bypass Surgery Has Early Differential Effects on Bile Acids and the Levels of Complement Component 3 and Acylation-Stimulating Protein
Obesity Surgery, Noel, Olivier F., Chu, Xin, Patterson, Andrew D., Edwards, Michael A., Still, Christopher D., Gerhard, Glenn S., 2020

Impact of facultative bacteria on the metabolic function of an obligate insect-bacterial symbiosis
mBio, Blow, Frances, Ankrah, Nana, Clark, Noah, Koo, Imhoi, Allman, Erik, Liu, Qing, Anitha, Mallappa, Patterson, Andrew D., Douglas, Angela, 2020

Metabolic impact of persistent organic pollutants on gut microbiota
Gut Microbes, Tian, Yuan, Gui, Wei, Rimal, Bipin, Koo, Imhoi, Smith, Philip B., Nichols, Robert G., Cai, Jingwei, Liu, Qing, Patterson, Andrew D., 2020

The gut microbiome: an orchestrator of xenobiotic metabolism
Acta Pharmaceutica Sinica B, Collins, Stephanie L., Patterson, Andrew D., 2020

Conducting influenza virus pathogenesis studies in avian species, Cardona, Carol J., Halvorson, David A., Hall, Jeffrey, Pantin-Jackwood, Mary J., Brown, Justin D., 2020

Wild bird surveillance for avian influenza virus, Poulson, Rebecca L., Brown, Justin D., 2020

Limited detection of antibodies to clade 2.3.4.4 a/Goose/Guangdong/1/1996 lineage highly pathogenic h5 avian influenza virus in North American waterfowl
Journal of Wildlife Diseases, Stallknecht, David E., Kienzle-Dean, Clara, Davis-Fields, Nick, Jennelle, Christopher S., Bowman, Andrew S., Nolting, Jacqueline M., Boyce, Walter M., Crum, James M., Santos, Jefferson J.S., Brown, Justin D., Prosser, Diann J., De La Cruz, Susan E.W., Ackerman, Joshua T., Casazza, Michael L., Krauss, Scott, Perez, Daniel R., Ramey, Andrew M., Poulson, Rebecca L., 2020

Two unprecedented auk wrecks in the northwest Atlantic in winter 2012/13
Marine Ornithology, Diamond, Antony W., McNair, Douglas B., Ellis, Julie C., Rail, Jean François, Whidden, Erin S., Kratter, Andrew W., Courchesne, Sarah J., Pokras, Mark A., Wilhelm, Sabina I., Kress, Stephen W., Farnsworth, Andrew, Iliff, Marshall J., Jennings, Samuel H., Brown, Justin D., Ballard, Jennifer R., Schweitzer, Sara H., Okoniewski, Joseph C., Gallegos, John B., Stanton, John D., 2020

CLINICAL CHALLENGE: YEW TOXICOSIS in BLACK BEARS (URSUS AMERICANUS)
Journal of Zoo and Wildlife Medicine, Mee, Natalie C., Murphy, Lisa, Brown, Justin, Fisher, Jennifer, Fisher, J, Brooks, Jason, Ternent, Mark, Brooks, J, 2020

Preliminary results (Fall 2018 and Spring 2019), a survey for West Nile virus exposure in ruffed grouse and wild turkey populations in Eastern Canada, MacDonald, AM, Splawinski, TB, Brown, Justin, Nemeth, NM, Kunkel, M, Thomas, PJ, 2020

Uncovering Bioactive Natural Products Via Biochemometric Methodologies, Kellogg, Joshua, Cech, Nadja, 2020

Metabolomics, an essential tool in exploring and harnessing microbial chemical ecology
Phytobiomes Journal, Kellogg, Joshua, Kang, Seogchan, 2020

Aspergillosis in Poultry
Merck Veterinary Manual, Kromm, Michelle, Lighty, Megan, 2020

Backyard Turkey Health
Penn State Extension Website, Lighty, Megan, 2020

Deworming Backyard Poultry
Penn State Extension Website, Lighty, Megan, 2020

Complete Genome Sequences of Seven Avibacterium paragallinarum Isolates from Poultry Farms in Pennsylvania, USA
Genome Announcements, Byukusenge, Maurice, Nissly, Ruth, Li, Lingling, Pierre, Traci, Mathews, Tammy, Wallner-Pendleton, Eva, Dunn, Patricia, Barnhart, Denise, Loughrey, Sean, Davison, Sherrill, Kelly, Donna, Tewari, Deepanker, Tewari, BDeepanker, Jayarao, Bhushan M., Kuchipudi, Suresh V., Kuchipudi, Suresh, V, None, 2020

Draft genome sequences of two virulent Streptococcus equi subsp. zooepidemicus swine isolates from Pennsylvania
Genome Announcements, Surendran Nair, M, Nair, Meera Surendran, Byukusenge, Maurice, Li, Lingling, Nissly, R, Cavener, V, Yon, Michele, Barry, Rhiannon, Natesan, Pazhanivel, Thirumalapura, Nagaraja, Tewari, Deepanker, Jayarao, Bhushan M., Kuchipudi, Suresh V., Kuchipudi, Suresh, V, None, 2020